G280568


Basic Information

Item Value
gene id G280568
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000071
NCBI id null
chromosome length 5214881
location 1074861 ~ 1075309 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU318111
CCATCACTAGATATTGTTGAATAAAGTCGTTATTTAGTTTTTTTGGTGCACAAAAAGTATTCTTGTCTCTTCATAACATTAAGGTTGGTCACATGAACTGTTTATATGTCTTAAATATGTCTTTAGTAGCTTTCTGGGCCTTGAAAAAGGAAATGATCTTGTTGGCAATGCAGGCCTCACTGAGCCATCGTATTTTATCAAAAATATCCTAATTTGTGTTCTGAAGATGAACGAAGGTCTTACGGGTGTGGAACGACATGAGGGTGAGTAATAAATTACATAATTATTATTTTTGGATGAACTAACACTTTAAGAAAAAAGGAAGAAAATAAGACTTGCCAGGAAAACTGGGGCCTGTTGCATAAACACTGCTGCTAAGTTGAGACTGTGTCTTAAGAACTGGTGTGACCAACTAGCAATTAGTTACGGCTAATCAGTCTTACTTTTCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU318111 True 449 lncRNA 0.36 1 1074861 1075309

Neighbor

gene id symbol gene type direction distance location
CI01000071_00971517_00971823 NA coding upstream 102644 971037 ~ 972217 (+)
CI01000071_00965582_00968758 NA coding upstream 105500 965001 ~ 969361 (+)
CI01000071_00923006_00927912 NA coding upstream 146373 922752 ~ 928488 (+)
CI01000071_00880705_00897817 TRPV4 coding upstream 176416 880705 ~ 898445 (+)
CI01000071_00867024_00871868 NA coding upstream 201542 866841 ~ 873319 (+)
CI01000071_01086147_01088260 NA coding downstream 10838 1086147 ~ 1088399 (+)
CI01000071_01113148_01115596 KCTD10 coding downstream 37839 1113148 ~ 1116722 (+)
CI01000071_01139373_01146663 FOXN4 coding downstream 63755 1139064 ~ 1146678 (+)
CI01000071_01374449_01376813 NA coding downstream 298687 1373996 ~ 1377670 (+)
CI01000071_01380924_01388813 RANBP1 coding downstream 305249 1380558 ~ 1388948 (+)
G280565 NA non-coding upstream 7341 1067287 ~ 1067520 (+)
G280563 NA non-coding upstream 8894 1065456 ~ 1065967 (+)
G280561 NA non-coding upstream 14955 1059681 ~ 1059906 (+)
G280560 NA non-coding upstream 15596 1058989 ~ 1059265 (+)
G280558 NA non-coding upstream 19745 1054798 ~ 1055116 (+)
G280546 NA non-coding downstream 14131 1089440 ~ 1089716 (+)
G280599 NA non-coding downstream 33918 1109227 ~ 1110463 (+)
G280614 NA non-coding downstream 131966 1207275 ~ 1207574 (+)
G280628 NA non-coding downstream 167987 1243296 ~ 1243520 (+)
G280646 NA non-coding downstream 205226 1280535 ~ 1282423 (+)
G280443 NA other upstream 152765 905217 ~ 922096 (+)
CI01000071_00792254_00802384 SLC6A4B, SLC6A4 other upstream 271544 791346 ~ 803317 (+)
CI01000071_02815324_02834097 NA other downstream 1729335 2815127 ~ 2835525 (+)
G282080 NA other downstream 1980775 3056084 ~ 3056531 (+)

Expression


Co-expression Network