G280546


Basic Information

Item Value
gene id G280546
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000071
NCBI id null
chromosome length 5214881
location 1089440 ~ 1089716 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU318089
TGGGTTTAAAGATAGTTTTTTATTAAATATTTAAAGAGACTTTCCCACAGTGAGGGTAAAAAGGCATTTGATTTGTGTCCTCACTGCAGCAATGGTTCTTACAGAATAGTGCACCAACCCTGACTCTTCAGATTCAGAGAGCTGGCCAGGCTGACCAAGGACAGGTTGCGGTCCTCATAAGGTGGATAACGCAAGAATGTCATGCACTCAATCCGGGTGGTTCGCAGAAGGCAGGACTTCTTATGAGAGAATGCATCAAAACTGTACTGACCATGAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU318089 True 277 lncRNA 0.44 1 1089440 1089716

Neighbor

gene id symbol gene type direction distance location
CI01000071_01086147_01088260 NA coding upstream 1041 1086147 ~ 1088399 (+)
CI01000071_00971517_00971823 NA coding upstream 117223 971037 ~ 972217 (+)
CI01000071_00965582_00968758 NA coding upstream 120079 965001 ~ 969361 (+)
CI01000071_00923006_00927912 NA coding upstream 160952 922752 ~ 928488 (+)
CI01000071_00880705_00897817 TRPV4 coding upstream 190995 880705 ~ 898445 (+)
CI01000071_01113148_01115596 KCTD10 coding downstream 23432 1113148 ~ 1116722 (+)
CI01000071_01139373_01146663 FOXN4 coding downstream 49348 1139064 ~ 1146678 (+)
CI01000071_01374449_01376813 NA coding downstream 284280 1373996 ~ 1377670 (+)
CI01000071_01380924_01388813 RANBP1 coding downstream 290842 1380558 ~ 1388948 (+)
CI01000071_01392755_01411463 GOLGA3 coding downstream 303039 1392755 ~ 1412681 (+)
G280568 NA non-coding upstream 14131 1074861 ~ 1075309 (+)
G280565 NA non-coding upstream 21920 1067287 ~ 1067520 (+)
G280563 NA non-coding upstream 23473 1065456 ~ 1065967 (+)
G280561 NA non-coding upstream 29534 1059681 ~ 1059906 (+)
G280560 NA non-coding upstream 30175 1058989 ~ 1059265 (+)
G280599 NA non-coding downstream 19511 1109227 ~ 1110463 (+)
G280614 NA non-coding downstream 117559 1207275 ~ 1207574 (+)
G280628 NA non-coding downstream 153580 1243296 ~ 1243520 (+)
G280646 NA non-coding downstream 190819 1280535 ~ 1282423 (+)
G280662 NA non-coding downstream 216182 1305898 ~ 1306142 (+)
G280443 NA other upstream 167344 905217 ~ 922096 (+)
CI01000071_00792254_00802384 SLC6A4B, SLC6A4 other upstream 286123 791346 ~ 803317 (+)
CI01000071_02815324_02834097 NA other downstream 1714928 2815127 ~ 2835525 (+)
G282080 NA other downstream 1966368 3056084 ~ 3056531 (+)

Expression


Co-expression Network