G280628


Basic Information

Item Value
gene id G280628
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000071
NCBI id null
chromosome length 5214881
location 1243296 ~ 1243520 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU318172
CGGGAGTCGCCTGTCAATGGCGTCATATCCGCGTTACCCTCGGTTTCCTGTTTTATGTTGTTACTATTTTGTCAAGTAGCTAATACAGCATTTTCTCCATCATACATTACTTTTATAAAATTAATTGCATGCCATTAATCAAGCCACCCAGCATTTATTATTATATTCTAAACTCGATCTAGCTTTCTGCAGTGTGCAACAAGTGTCTCACAGCAGCCGCCGACC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU318172 True 225 lncRNA 0.41 1 1243296 1243520

Neighbor

gene id symbol gene type direction distance location
CI01000071_01139373_01146663 FOXN4 coding upstream 96618 1139064 ~ 1146678 (+)
CI01000071_01113148_01115596 KCTD10 coding upstream 126574 1113148 ~ 1116722 (+)
CI01000071_01086147_01088260 NA coding upstream 154897 1086147 ~ 1088399 (+)
CI01000071_00971517_00971823 NA coding upstream 271079 971037 ~ 972217 (+)
CI01000071_00965582_00968758 NA coding upstream 273935 965001 ~ 969361 (+)
CI01000071_01374449_01376813 NA coding downstream 130476 1373996 ~ 1377670 (+)
CI01000071_01380924_01388813 RANBP1 coding downstream 137038 1380558 ~ 1388948 (+)
CI01000071_01392755_01411463 GOLGA3 coding downstream 149235 1392755 ~ 1412681 (+)
CI01000071_01416847_01427453 ANKLE2 coding downstream 172894 1416414 ~ 1428798 (+)
CI01000071_01436960_01442221 POLI coding downstream 193440 1436960 ~ 1442520 (+)
G280614 NA non-coding upstream 35722 1207275 ~ 1207574 (+)
G280599 NA non-coding upstream 132833 1109227 ~ 1110463 (+)
G280546 NA non-coding upstream 153580 1089440 ~ 1089716 (+)
G280568 NA non-coding upstream 167987 1074861 ~ 1075309 (+)
G280565 NA non-coding upstream 175776 1067287 ~ 1067520 (+)
G280646 NA non-coding downstream 37015 1280535 ~ 1282423 (+)
G280662 NA non-coding downstream 62378 1305898 ~ 1306142 (+)
G280676 NA non-coding downstream 113755 1357275 ~ 1370979 (+)
G280695 NA non-coding downstream 222728 1466248 ~ 1517469 (+)
G280443 NA other upstream 321200 905217 ~ 922096 (+)
CI01000071_00792254_00802384 SLC6A4B, SLC6A4 other upstream 439979 791346 ~ 803317 (+)
CI01000071_02815324_02834097 NA other downstream 1561124 2815127 ~ 2835525 (+)
G282080 NA other downstream 1812564 3056084 ~ 3056531 (+)

Expression


Co-expression Network