G280646


Basic Information

Item Value
gene id G280646
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000071
NCBI id null
chromosome length 5214881
location 1280535 ~ 1282423 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU318192
CTCCGCTGAGGGTTCGGACCTCGATGATGCTCTGACCCAAAAAGTCATCGGATTCCCTTTTCAGACGCTGCTTCACACGAGACTTTATATCATCATCTTCATCCCATACGCGCAGTTTAATGCGATCAGATGAATTGTGGCACTCAAAGTTGAACGTCTCCTCCCACACAGGGTTAAGGTTACCGTAGATAGTTTTGGTTCTCTTCTTAGTCTTGCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU318192 True 217 lncRNA 0.47 2 1280535 1282423

Neighbor

gene id symbol gene type direction distance location
CI01000071_01139373_01146663 FOXN4 coding upstream 133857 1139064 ~ 1146678 (+)
CI01000071_01113148_01115596 KCTD10 coding upstream 163813 1113148 ~ 1116722 (+)
CI01000071_01086147_01088260 NA coding upstream 192136 1086147 ~ 1088399 (+)
CI01000071_00971517_00971823 NA coding upstream 308318 971037 ~ 972217 (+)
CI01000071_00965582_00968758 NA coding upstream 311174 965001 ~ 969361 (+)
CI01000071_01374449_01376813 NA coding downstream 91573 1373996 ~ 1377670 (+)
CI01000071_01380924_01388813 RANBP1 coding downstream 98135 1380558 ~ 1388948 (+)
CI01000071_01392755_01411463 GOLGA3 coding downstream 110332 1392755 ~ 1412681 (+)
CI01000071_01416847_01427453 ANKLE2 coding downstream 133991 1416414 ~ 1428798 (+)
CI01000071_01436960_01442221 POLI coding downstream 154537 1436960 ~ 1442520 (+)
G280628 NA non-coding upstream 37015 1243296 ~ 1243520 (+)
G280614 NA non-coding upstream 72961 1207275 ~ 1207574 (+)
G280599 NA non-coding upstream 170072 1109227 ~ 1110463 (+)
G280546 NA non-coding upstream 190819 1089440 ~ 1089716 (+)
G280568 NA non-coding upstream 205226 1074861 ~ 1075309 (+)
G280662 NA non-coding downstream 23475 1305898 ~ 1306142 (+)
G280676 NA non-coding downstream 74852 1357275 ~ 1370979 (+)
G280695 NA non-coding downstream 183825 1466248 ~ 1517469 (+)
G280705 NA non-coding downstream 213940 1496363 ~ 1496634 (+)
G280443 NA other upstream 358439 905217 ~ 922096 (+)
CI01000071_00792254_00802384 SLC6A4B, SLC6A4 other upstream 477218 791346 ~ 803317 (+)
CI01000071_02815324_02834097 NA other downstream 1522221 2815127 ~ 2835525 (+)
G282080 NA other downstream 1773661 3056084 ~ 3056531 (+)

Expression


Co-expression Network