G280695


Basic Information

Item Value
gene id G280695
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000071
NCBI id null
chromosome length 5214881
location 1466248 ~ 1517469 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU318249
CTTACACACACCACTTGAACCTTCTATAAAATAATCATTCATAAAGTTCAAAAAGGTTGAAGTGAATTACAAGGGTGTTTGCAGTGGGCTGTTTACATTAATCTCGCGTCATAAAAGCATTCTGAGGTGCAAATACATTGTCAGATTCAGTCGAACGCACGAGCGCTCTTCTTCATGAGCATTTGAGCATGCGGTCAAAAAATAGCCTAGAATGCCATCTGCTGTTAAAAACTAAGCTCAGAACCGATTTGCGATACATTTGGAAAATATCAGAAATGATCCATGAATTGCGATGCATAGATAGTATTGTCCCAGCCCTACTAAATACTACATACTAATAGATACATTAACAGTATGTAGATATTAATATAATACTAATATTTATGTCTTCACTACTATAATACTAATATTTATAAATTCTTCACTTTCAAATGTTCAAACCCTCAAGCTTTGTGACATTTCAAATCATTAAGTTTTATTTATTTTGGCGGAGCATTGGTGGAATACTGTAAACTTATGCCCACAAAAATGTTGGATATTATGTGTAAATAAAGTGAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU318249 True 559 lncRNA 0.33 2 1466248 1517469

Neighbor

gene id symbol gene type direction distance location
CI01000071_01443137_01445109 BRI3BP coding upstream 21082 1443137 ~ 1445166 (+)
CI01000071_01436960_01442221 POLI coding upstream 23728 1436960 ~ 1442520 (+)
CI01000071_01416847_01427453 ANKLE2 coding upstream 37450 1416414 ~ 1428798 (+)
CI01000071_01392755_01411463 GOLGA3 coding upstream 53567 1392755 ~ 1412681 (+)
CI01000071_01380924_01388813 RANBP1 coding upstream 77300 1380558 ~ 1388948 (+)
CI01000071_01580310_01581199 NA coding downstream 62841 1580310 ~ 1581205 (+)
CI01000071_01677282_01720849 NA coding downstream 159813 1677282 ~ 1720849 (+)
CI01000071_01909999_01929819 NA coding downstream 391609 1909078 ~ 1930261 (+)
CI01000071_01966426_01969786 NA coding downstream 448624 1966093 ~ 1969786 (+)
CI01000071_02000540_02048898 NA coding downstream 482916 1993072 ~ 2049583 (+)
G280676 NA non-coding upstream 95269 1357275 ~ 1370979 (+)
G280662 NA non-coding upstream 160106 1305898 ~ 1306142 (+)
G280646 NA non-coding upstream 183825 1280535 ~ 1282423 (+)
G280628 NA non-coding upstream 222728 1243296 ~ 1243520 (+)
CI01000071_01514470_01525572 NA non-coding downstream 4522 1514315 ~ 1528807 (+)
G280740 NA non-coding downstream 213662 1731131 ~ 1731351 (+)
G280745 NA non-coding downstream 223422 1740891 ~ 1742345 (+)
G280772 NA non-coding downstream 267147 1784616 ~ 1784816 (+)
G280781 NA non-coding downstream 290607 1808076 ~ 1808304 (+)
CI01000071_01374449_01376813 NA other upstream 88578 1373996 ~ 1377670 (+)
G280443 NA other upstream 544152 905217 ~ 922096 (+)
CI01000071_00792254_00802384 SLC6A4B, SLC6A4 other upstream 662931 791346 ~ 803317 (+)
CI01000071_02815324_02834097 NA other downstream 1287175 2815127 ~ 2835525 (+)
G282080 NA other downstream 1538615 3056084 ~ 3056531 (+)

Expression


Co-expression Network