G280745


Basic Information

Item Value
gene id G280745
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000071
NCBI id null
chromosome length 5214881
location 1740891 ~ 1742345 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU318308
GTGTACTCCAAAACATCAACTTTCTGTGTAAGACTGTAAAAAATATAGACGTAGTGTCCGTGACGTCACCCGTAGATTTCTGTAAAGCATTTTTGAAGTCCATAAGCGGCCGTTGCCATCTTGGCAGCGCGTCATCGCCCGTCACTCCCGGATAACTGAAAATGGGCAAAGAGGCAGAACGTAGTTGGAACTGAGGCTCAAAGTGATCATGTTAGCAGGCTAAGGAGCTATCTATCTATCTTAGACACTATCTAAAATATTAATAAAGATAACAAGCTATATCATTTGAAAGTTCTAAAGGTTTACCGTCAATCTACGGTGTCTTTTTTATGATATAAATGCTCCAGCAACAGTAATATTGTAATTTGTGTCGGGTGTGCAAATGACAACACGCAAAATCAAAACGGGACTTCATACCTTTGTAATGAAATAGCGATTGTGAGATGAATCCAATCCGTCGCACTTGGGTAAAATGTCCATGAGTGTCCATTGAAAAACAAACAACACTTTTTGTCCAGAAAAGCGATAAATCCAAGAAATATTGATATATTGTCCATTGTTTGCATCACATTTCTTCGGAATGATCTGCTCTCCATCATCGTTCTTCAAGAAATTATGCAATCTGAGCAGCGTTTATGTTGTAAAACTGTATATGATCATATACATTGGACTCTCACAAACAAATGAGCCTGCGTCCAAAGTATAATTTTTCAAAATAGTGCAGCAGTTTTAGTTATAATATCCAAGCAGTGCTGTCGGATTTTGTGGTGTCTTGAGAGGCATATTCTCCAGCCTTTGTCATTGTAGTAAATCTGACGAACAAAACTTTTAGCCAATGCCAAGACGATCCAACAACGTGTGTTCTGTTTATCTTTCGCATGTGTGCACATGTGCACAGACGACCATAAACCGCACCGCAAGCCACATTATTTGATAATTGTGTGAAATAATCCCGAAAAAAGCACAAACACGGCAGAGATGCCAAATTCAGTGGCTGGAATTAGCTGAGGTAACGTGACGGCTCACAGACAGCAGCGGCAATCCACCTGTCACTCAAGTGGCCACGCCCTTAATTATACAGAACTTTAAGGCTTAATATAATTTAAACGGATGAGTTTAAAAAAAATTCACCCTCCTCAGAGTTGTCATGAAGGGCAAAATTAGCTGTATAGACCAAAACCACAATTTGTACCAGGCTGTAAACATGTTTTTTCTGCTGTAAAGTTGGGCATTTTAACATGGTCTCTTTTAGAGCCTGTCCCTAGCGGCCAGTCGATGAATTGCAGTTTAAGTCACATCCGTATTGGTTTCAAGAGAAACTGGGGGAGGTTGCCGCTTGGTAAATACGCATCCTACTACAGCTGTATATTAAACATCAAATATGAACTGATTGGCTGGTTTTATGTCCCTTCACACAGCATTATTGCTTTAAAGGGATAGTTCATCAAAAACAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU318308 True 1455 lncRNA 0.40 1 1740891 1742345

Neighbor

gene id symbol gene type direction distance location
CI01000071_01677282_01720849 NA coding upstream 20042 1677282 ~ 1720849 (+)
CI01000071_01580310_01581199 NA coding upstream 159686 1580310 ~ 1581205 (+)
CI01000071_01514470_01525572 NA coding upstream 215296 1514315 ~ 1528807 (+)
CI01000071_01452292_01490229 AACS coding upstream 249979 1450564 ~ 1490912 (+)
CI01000071_01443137_01445109 BRI3BP coding upstream 295725 1443137 ~ 1445166 (+)
CI01000071_01909999_01929819 NA coding downstream 166733 1909078 ~ 1930261 (+)
CI01000071_01966426_01969786 NA coding downstream 223748 1966093 ~ 1969786 (+)
CI01000071_02000540_02048898 NA coding downstream 258040 1993072 ~ 2049583 (+)
CI01000071_02063411_02065517 NA coding downstream 321066 2063411 ~ 2065565 (+)
CI01000071_02105220_02105800 NA coding downstream 362875 2105220 ~ 2106022 (+)
G280740 NA non-coding upstream 9540 1731131 ~ 1731351 (+)
G280695 NA non-coding upstream 223422 1466248 ~ 1517469 (+)
G280705 NA non-coding upstream 244257 1496363 ~ 1496634 (+)
CI01000071_01380924_01388813 RANBP1 non-coding upstream 359988 1380558 ~ 1388948 (+)
G280772 NA non-coding downstream 42271 1784616 ~ 1784816 (+)
G280781 NA non-coding downstream 65731 1808076 ~ 1808304 (+)
G280783 NA non-coding downstream 69278 1811623 ~ 1812051 (+)
G280787 NA non-coding downstream 78859 1821204 ~ 1821479 (+)
G281377 NA non-coding downstream 145331 1887676 ~ 1888021 (+)
CI01000071_01374449_01376813 NA other upstream 363221 1373996 ~ 1377670 (+)
G280443 NA other upstream 818795 905217 ~ 922096 (+)
CI01000071_00792254_00802384 SLC6A4B, SLC6A4 other upstream 937574 791346 ~ 803317 (+)
CI01000071_02815324_02834097 NA other downstream 1062299 2815127 ~ 2835525 (+)
G282080 NA other downstream 1313739 3056084 ~ 3056531 (+)

Expression


Co-expression Network