G280787


Basic Information

Item Value
gene id G280787
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000071
NCBI id null
chromosome length 5214881
location 1821204 ~ 1821479 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU318350
GTTTAGCCGTCCCAGGCCCGCTTGGAAGAGGTGGGCCAGAGCGAGGTTCGGTTGGGCTCGAGCGCGGTTCGCATGCAGTATGAGCGCTAACCGTGCCAGAGCACGGAACAGTTACCACTTTTGTGTGCGCTACTGTCATAATTATGATGGCAAACATCTTTATTACTACTTTGATAGTACACTTATCAATTCATGTAATTAATTCGAGTGTATTTAGGTTTATAACGAATCTGATTCTCACCTTATTGATGAACTGCAAATTCCTCCATCAACGTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU318350 True 276 lncRNA 0.45 1 1821204 1821479

Neighbor

gene id symbol gene type direction distance location
CI01000071_01677282_01720849 NA coding upstream 100355 1677282 ~ 1720849 (+)
CI01000071_01580310_01581199 NA coding upstream 239999 1580310 ~ 1581205 (+)
CI01000071_01514470_01525572 NA coding upstream 295609 1514315 ~ 1528807 (+)
CI01000071_01452292_01490229 AACS coding upstream 330292 1450564 ~ 1490912 (+)
CI01000071_01443137_01445109 BRI3BP coding upstream 376038 1443137 ~ 1445166 (+)
CI01000071_01909999_01929819 NA coding downstream 87599 1909078 ~ 1930261 (+)
CI01000071_01966426_01969786 NA coding downstream 144614 1966093 ~ 1969786 (+)
CI01000071_02000540_02048898 NA coding downstream 178906 1993072 ~ 2049583 (+)
CI01000071_02063411_02065517 NA coding downstream 241932 2063411 ~ 2065565 (+)
CI01000071_02105220_02105800 NA coding downstream 283741 2105220 ~ 2106022 (+)
G280783 NA non-coding upstream 9153 1811623 ~ 1812051 (+)
G280781 NA non-coding upstream 12900 1808076 ~ 1808304 (+)
G280772 NA non-coding upstream 36388 1784616 ~ 1784816 (+)
G280745 NA non-coding upstream 78859 1740891 ~ 1742345 (+)
G280740 NA non-coding upstream 89853 1731131 ~ 1731351 (+)
G281377 NA non-coding downstream 66197 1887676 ~ 1888021 (+)
G281417 NA non-coding downstream 162043 1983522 ~ 1992903 (+)
G281424 NA non-coding downstream 184530 2006009 ~ 2007559 (+)
G281406 NA non-coding downstream 228676 2050155 ~ 2052383 (+)
CI01000071_01374449_01376813 NA other upstream 443534 1373996 ~ 1377670 (+)
G280443 NA other upstream 899108 905217 ~ 922096 (+)
CI01000071_00792254_00802384 SLC6A4B, SLC6A4 other upstream 1017887 791346 ~ 803317 (+)
CI01000071_02815324_02834097 NA other downstream 983165 2815127 ~ 2835525 (+)
G282080 NA other downstream 1234605 3056084 ~ 3056531 (+)

Expression


Co-expression Network