G281406


Basic Information

Item Value
gene id G281406
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000071
NCBI id null
chromosome length 5214881
location 2050155 ~ 2052383 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU319036
GGATTTTTCTTCTTTTTCTGCATATTTTATAATTTATTTGTACAAATTAGTTAATATGCATTGCCATTTTGATTAGTTGAAAGTAGCACTTTCTATTAAGATATTTTTTTTTGTTTTCAATGAACGAATGTTGGAAGAGAATTAAAATGCTATTATAGGATGTCTTAGGAAATGTTCTTTGAGAAAGTTACATGTGTAGTTAAGATGCTTGTTTCTGAATGCTGGATCCATTTGAGAGAGTTGAAAGAAGCTGTCATAATGACATATGACACATGGTCTTTATCCTGTCGTTCAAACGTTTAGGGTCAGTAAGTTTTTTTTATTTATTATTATTTTATTTTTTTTTAAATGTCAAGGACATTAAATTGATCAAAAGTGACAGTAAAGACTTTTATGATGTTACAGAAAACTTTCAGAATTTCAAAAAATACTGTTCTGTTGGTCAAAGAAAGCAGCACAACTGACAACATTGATAATAATAAGAAAAGTTTCTTGATCACCAAATCAACATAGAATGATGTGACTCTGAAGACTGAAGCCTTCAGTGATTAGCCATGTCGGAATTACCATAATTAGGAGATTACGACTTGTAAAAAGCATTCACGTCCTCGTGGAATTCGTAATTACAACTAGTAAACTGGTGAATTTTCGGAGAGCTACGACTTGTACCATGTGACCACTTTGATAGTTGATAGTGTTGCCTTAAAAACTCGTAATTCCAAAGACGTGAACAGCTCAGAGTAGAACATCATCTCAAAATTACGGTAACAAAATGGCATGAATGCAACAAATGACTGCTGAAAATTTAGCTTTGATATAATATTTCACAATATTACTGTTGTATTTTTGATCAAATAAATGCAGCCTTGGTTAGCATAAGAGATTTCTTTCAAAAAACATTCAAAAATCTTAACGACCCCAAACTGTTGACCGGTAGCGTATTTTAAAGTAAATATCTTCATATGTCCATTTCATATCATTCAGTTCTGGAATACCCAACATACCTTTGTGATAAATGTTGGCTAAGGAAGTTTAATTCAGAAAACCTCAGCCTCACTCTCCCTTCTCACTTTCAAGAGTAATTGTAGTCACTTTTGATTCTACAGCAAGGGCAAAAAGAACAAAAGAAACTAAAACGATCCTTCAAACACTGGTGTGTGTATTGTGCAGGCATCTGTATTATGCAGACAAATGCTCACATTTAAAATGAGGGAATTTATTAACCTTACTTAGAATAACAACCCTTAAAATAAAATTAGTTAAATAAGGGTTATTAGCTCATTTTGAGCCAGTTATGTTACATAGTTATGGCCTATAACAACTTCTTAAGTTTACCCTGCTTGGTTCATGTCCTCATTATCTTATGGATTTTAATTTTAAAAGGGGAGACGAATAATTTTAGTTTTTTTAAGAGAGAGAGCTTGAAAGTGAAAGAAACAGGTCTTGAAAATTGTCACTGGCGGATTAAAAATAAAAAATTAACAACTGAAATGAAATATTTTAAATTTATTTATTTTATAATTTTTTTTTAAAGTTAAGTGAAGTGAAATTAAATTTTTCTCAAGAAATTAAATGGACAGCACAGGCGAAAGTGGCAAACTCCTACCTGCCTGTTGAAAGCTTCATCGTGGCCTGTTCGTGATTAAAGACCTAACAATTTTATAAGGATCATTTTGTAGTGAAGTGTTGATTAGATTATCGACATCTCTGACAGGGTGATCTTACAGATGTCTTGCTGACTGAAAATGCACCGAACTTGGAGTTCACTGCTGCTCATCAGATGACTATCCAAGGAATTCATAGTGATTTCCTCACAGATCTGCCTTAGGGGTCTAACATACAGACACTCAAGCACTGATATAGTACAAACATCATTTCGGTGCCTGTGAAAAGAGTCATAATCCCAGTCAAACAGCTCCTTGAAATTGTAAATAACTCATATGGTCATGGAAAGGCCTTTACAGTTTGCCAGGCTCCATATGTGTGAATGTTTCACTGTGTTTGGTCATGTCTTCATCTCTGTCCTTCACTGCCGCTGTCTGGCACAGCGTCACCTGCTTAAATGAAACAAGTTGTACAGTTAAAGAAAAAGAACAACTATGGGACTTTTTTTGTGATGAAGTATTTCGTTGAGATGAAATGAAGACATTATAGTTTCATATCAAGGTACATCTATTATTTTTGTTCATCAAGAGAAAAAAAAGCTGAATAAATATAACTTGAACAGTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU319036 True 2229 lncRNA 0.33 1 2050155 2052383

Neighbor

gene id symbol gene type direction distance location
CI01000071_02000540_02048898 NA coding upstream 572 1993072 ~ 2049583 (+)
CI01000071_01966426_01969786 NA coding upstream 80369 1966093 ~ 1969786 (+)
CI01000071_01909999_01929819 NA coding upstream 119894 1909078 ~ 1930261 (+)
CI01000071_01677282_01720849 NA coding upstream 329306 1677282 ~ 1720849 (+)
CI01000071_01580310_01581199 NA coding upstream 468950 1580310 ~ 1581205 (+)
CI01000071_02063411_02065517 NA coding downstream 11028 2063411 ~ 2065565 (+)
CI01000071_02105220_02105800 NA coding downstream 52837 2105220 ~ 2106022 (+)
CI01000071_02137176_02137478 NA coding downstream 83623 2136006 ~ 2137909 (+)
CI01000071_02329452_02331682 NA coding downstream 276849 2329232 ~ 2332031 (+)
CI01000071_02417387_02420895 NA coding downstream 363647 2416030 ~ 2421297 (+)
G281424 NA non-coding upstream 42596 2006009 ~ 2007559 (+)
G281417 NA non-coding upstream 57252 1983522 ~ 1992903 (+)
G281377 NA non-coding upstream 162134 1887676 ~ 1888021 (+)
G280787 NA non-coding upstream 228676 1821204 ~ 1821479 (+)
G281412 NA non-coding downstream 23347 2075730 ~ 2076186 (+)
G281451 NA non-coding downstream 46358 2098741 ~ 2098967 (+)
G281480 NA non-coding downstream 98609 2150992 ~ 2151588 (+)
G281517 NA non-coding downstream 152438 2204821 ~ 2207349 (+)
G281691 NA non-coding downstream 360231 2412614 ~ 2414898 (+)
CI01000071_01374449_01376813 NA other upstream 672485 1373996 ~ 1377670 (+)
G280443 NA other upstream 1128059 905217 ~ 922096 (+)
CI01000071_00792254_00802384 SLC6A4B, SLC6A4 other upstream 1246838 791346 ~ 803317 (+)
CI01000071_02815324_02834097 NA other downstream 752261 2815127 ~ 2835525 (+)
G282080 NA other downstream 1003701 3056084 ~ 3056531 (+)

Expression


Co-expression Network