G281517


Basic Information

Item Value
gene id G281517
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000071
NCBI id null
chromosome length 5214881
location 2204821 ~ 2207349 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU319148
AATCTCAATAATCCTACAAATAGCTTCAGATCTTAAATCTGAAATTAATCACATGTATGAAGGAATACAAAAGTACCTTAATGGATTAGTTCACTTTAAATTGAAAATTACATTGAAATTGAACTAATCCTTTAAAATAACACTATAGTATAAATTACAACAGTTAAACTGTTGTTTACTCAACATGCTCAAATTTAGCATGCTAATATACGTAGTAACTCACATATTAACAGTAAGCAAACTGTAACTGTACATGATATAACTTAACTTAATCTAGTACTTCCATTACATGTGTCATCATGAGAAATCACATTTTCCTTGATCTGAGCTAAAACAGCTTGATGTACTACAAAAACACGCATTCAGATCTCAAATGCCTGCTAGCATGGCAATTCCATGTAAGACAGTTTAGGTAAAGGAGTTAATAAAAACGGGTAGGTTTTAAAAAGCAGTGGCCCATCAAATTGGGGCCAACACAAAGATAAAAGCCAAGCGTGTGGCGCTAATGCTTCCAGTGTCACACTGAACAACATGATATTTGACAGGACAAATAGCTTGAATTGAGAGATGGAGAAGGGTTAGGCTGTCAATAAAGACAGTAATGCTCGTCAGCTGTAAAGCCCTTCAGTTAAAGGGGAAAAATGTCTGTGTTTACCTGAAGTGGCTGAAATGGCTGGGTGTGTTATGTGACATGCTGTCACACTGATGTAACGGGCAGAGATACAAGAGGAATGAAATAACAGAAATCTCTTTAAGCTGCCCAACACAATAGACAGTTCTCAGTGTTCACCTGTCAGGTAAGATAGAATCACACCTGACAGCTCTGTTCCTGAGTCATGCAACTGTGGAAATCTGTGACAATGCAGCTACCGGACTGAATGGATTGTGTTACGGTTCCAATGCCAATCCAGATGCTTTTCATACCTTTTTCTGCAGAACTAAACTATATTTTAAGATGCTTCATTTTAAATGATTAATTTGAACTGAAAGCATTTGAATCATAACCAATGCAATTAAATGGGAATCGAAAAACGATTCCAATTCTGGAATCGGATACTTAAAGGGATAGTTCACCCAAAAATGAAATTTAAACAATAAACACCGTTTTGTGGCTCTTTAATGTGTCGTGACAGATCGCTGTAGCGTCTCAGTTCAAGCAGCTCGTGAACCAATCATCTCTTATACTAGTTCATTTATAGCATGAACATCATAAGGAATCATTTCAATCGCGGAAAGATGTCAGTACGCACCATTTTTCAAGTTCAAGTCCACCTACGTTAATCTGCTAACTCCCCTGACTGCTTTGTCGGACAAAATGGCGGATTCGGCATTATGACTGATTAGATCGCCTGTCAATCAAACTCCTGGTGAAGGGTCAATTACCCAAAAGTCCACAGCCTAAATGTCACGAGTGGAAAAGGAAGTAATGTTGTAGAAAGAACAACTGATTAAAAATGACAAATACTTTCTATGGAAAAACATGCACAGTTAAGATTCACAATAAGAAACATGCATTAGGCAATTATGCAAATGTTGACTTTAAGATACTACATTATAAGACTTAACATACTAATATATGCTAGAAATCGGCTTAAAATACTGAGAAATACCGGTGGCATGAAAATGAATCCAGATAAAGAGTTGAATCACATCAGCTGGGTTCTTTATCAAAGTCTAATCTTTCTTTACAGAAACCTTTAAAAGAAATCATTTCCTTTAGAAACAAACACAAAAACATCTGTCAGCCAATTCAAAACAGGAAATGATTGTTCAAAAAC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU319148 True 1778 lncRNA 0.36 2 2204821 2207349

Neighbor

gene id symbol gene type direction distance location
CI01000071_02137176_02137478 NA coding upstream 66912 2136006 ~ 2137909 (+)
CI01000071_02105220_02105800 NA coding upstream 98799 2105220 ~ 2106022 (+)
CI01000071_02063411_02065517 NA coding upstream 139256 2063411 ~ 2065565 (+)
CI01000071_02000540_02048898 NA coding upstream 155238 1993072 ~ 2049583 (+)
CI01000071_01966426_01969786 NA coding upstream 235035 1966093 ~ 1969786 (+)
CI01000071_02329452_02331682 NA coding downstream 121883 2329232 ~ 2332031 (+)
CI01000071_02417387_02420895 NA coding downstream 208681 2416030 ~ 2421297 (+)
CI01000071_02539510_02615505 GALNT9 coding downstream 331834 2539183 ~ 2616293 (+)
CI01000071_02656286_02658917 ATAD1A coding downstream 448937 2656286 ~ 2659097 (+)
CI01000071_02770135_02797577 PIWIL2 coding downstream 561888 2769237 ~ 2797773 (+)
G281480 NA non-coding upstream 53233 2150992 ~ 2151588 (+)
G281451 NA non-coding upstream 105854 2098741 ~ 2098967 (+)
G281412 NA non-coding upstream 128635 2075730 ~ 2076186 (+)
G281406 NA non-coding upstream 152438 2050155 ~ 2052383 (+)
G281424 NA non-coding upstream 197262 2006009 ~ 2007559 (+)
G281691 NA non-coding downstream 205265 2412614 ~ 2414898 (+)
G281736 NA non-coding downstream 303483 2510832 ~ 2511149 (+)
G281737 NA non-coding downstream 304267 2511616 ~ 2511884 (+)
G281740 NA non-coding downstream 309715 2517064 ~ 2517270 (+)
G281742 NA non-coding downstream 311874 2519223 ~ 2519551 (+)
CI01000071_01374449_01376813 NA other upstream 827151 1373996 ~ 1377670 (+)
G280443 NA other upstream 1282725 905217 ~ 922096 (+)
CI01000071_00792254_00802384 SLC6A4B, SLC6A4 other upstream 1401504 791346 ~ 803317 (+)
CI01000071_02815324_02834097 NA other downstream 597295 2815127 ~ 2835525 (+)
G282080 NA other downstream 848735 3056084 ~ 3056531 (+)

Expression


Co-expression Network