XLOC_010593 (zgc:174935)


Basic Information

Item Value
gene id XLOC_010593
gene name zgc:174935
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 17711215 ~ 17713859 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00020758
GTAGCGTCATCGCCACTCTTTCCTAGCACTGCTTCTGTGAACAGGGAAATAGAGTTTAAAAAACACAGCAAACCTGGAATAAAGCGAATTTAGTGGTATAAGGAATTACACAGTCTTGATCAACTGACAAAATAGTTAAAAATCTATTGCTGTTAATACCAGAGATAATTAACAGCGTTTGCTTTACAATTATGCCGTTTTGTGGGTAGGCATAGTTTCTGCAACAAGTAACTCTGATCATCTGGACACCTGCATGAGAGAAACAGATTCTGAATCCCAGCTACCTCTTGATTCCTCAACCATGAAGTTTCCTGCCTTGCTTTTGGGATTTGTCCTGGTGTGTAGTCTGGGCATTGCTGGCTACATCCATACCAGGCGTAAGCAGGAACTGCAACTGAGCAAACAGGCATCATTTATAGATATTAAATTCAGAGTGACCAGAGATGTGCTTGGAGAATATCAAGATCAGTTGATTCAGTTCAGCACACAAATGGACAAGACTAAGACAGAGGTGGACAATCTAACCAAAGACCTGGACCAAGCAAAGACATCAGTAAATAAGAAAAAGGCTGACATTGACAACTGTAAAGGAGACAAGaaacgATTGACTGATGAAATAGCAGCTGCAGTGTCAGAGGAAAAGCATAAACAGGATGAGTTTGTGAAAGTGAAGTCTCAATGGACAACAGAAATTGATTCCCTACATAAGCAATTGGAGCAGGATAGCACACTTTGCAAGTACATTGACAAGGCGTCTGAAGAGGGAAAGAAACTGTGTAAAATAAAAGACCCTCAAAATGCAGAGCCAAAGCCTAAAGGACCAGAGGCAGAAAATCCTAAGGCAGAGGAAGCGAAAGCTGCACCAAAAGTGGACGAACCCAAAGCTGCAATACCAGTGGAACCCAAAGTTGATCAGCCAAAACCTGATGAAAATCCAAATGTTGCTGtggagtaaaaaaataataaataaatatataagttaaAGGAGCATATATTGTTTTTTCAGGGATTTAAAGAACAATACTACATCAGCGTCTACTGGACAATTATATAGGAAGATTAACTAAACTGGAACATCTTGCTTGGGTTGATCTTCAGCATTCCGGTTTTTCACCTGAGCACACCCAAACTTTGATCTGAGGTTTGACTGATGACATCACATCATACACCTGTTTTTTTTCctgacaaataaatatttatgaggAAATTGTCTGCTTTACCcacaattaaattatgaaaatgaaaagaaactgtttttctataaaaaaaatttttgttaaGGAAAAATCTGTCAGGTGTCTTTTCTTTCatttgtgtttgttattttataattttgttcttttttgtccATTACAGTGACATTTTAACCCTCCCTTAGGCTCACGCATACATTCCCTTTTTGTATCGACCAATGCAAAAGCTTTGACCCTCTTACTGTCACTCCTAATCATCCTCACTCTGTTGCTTCAGTTATTGACAAAAACAAGTGCAACCAATCAGATGCTTCACTGGGATGGAACACAGAAATTCTAAGAGTTATTTACTCTTCAGCCTCCTTTATGTTAGTTTCAGTTTTTGCAGGAAATACCTTGATGTTAAAATGAAGTTAGACATTGGTTGGAcactttttattgttttcttcaataattaaatatgtaaataaataattaaatgtttattttccagTAAA

Function

symbol description
zgc:174935 Predicted to be located in membrane. Predicted to be integral component of membrane.

GO:

id name namespace
GO:0008150 biological_process biological_process
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0003674 molecular_function molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-080204-78 Predicted to be located in membrane. Predicted to be integral component of membrane.

Ensembl:

ensembl_id ENSDARG00000079255

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00020758 True 1690 mRNA 0.37 4 17711215 17713859

Neighbor

gene id symbol gene type direction distance location
XLOC_010592 NA coding downstream 4451 17704830 ~ 17706764 (-)
XLOC_010591 si:dkey-17m8.1 coding downstream 12104 17671301 ~ 17699111 (-)
XLOC_010590 ccdc106a coding downstream 50621 17639896 ~ 17660594 (-)
XLOC_010589 m6pr coding downstream 124332 17578607 ~ 17586883 (-)
XLOC_010588 casp2 coding downstream 132712 17548695 ~ 17578503 (-)
XLOC_010594 NA coding upstream 109588 17823447 ~ 17824848 (-)
XLOC_010595 NA coding upstream 423783 18137642 ~ 18140068 (-)
XLOC_010596 NA coding upstream 431558 18145417 ~ 18150006 (-)
XLOC_010597 AL929304.1 coding upstream 655055 18368914 ~ 18372540 (-)
XLOC_010598 NA coding upstream 759084 18472943 ~ 18501141 (-)
XLOC_010626 CR392024.2 misc upstream 3181253 20895112 ~ 20895175 (-)
XLOC_010583 CR936322.2 non-coding downstream 463852 17247222 ~ 17247363 (-)
XLOC_010582 CR936322.1 non-coding downstream 466168 17244908 ~ 17245047 (-)
XLOC_010576 CU861451.1 non-coding downstream 591029 17120064 ~ 17120186 (-)
XLOC_010568 NA non-coding downstream 1107135 16593349 ~ 16604080 (-)

Expression


Co-expression Network