G282220


Basic Information

Item Value
gene id G282220
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000071
NCBI id null
chromosome length 5214881
location 3265511 ~ 3265829 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU319894
GTCAAGAGAACCAGGGTGATGCTCACTTCTGGGTCGGACTAAAAAAACTGTCATCACTGCTGCGCTCTCTTGACCACATGTGGGAAATCTGAAATGCAAACTCATGCGGATTTTGCTGCATTCCAAAGTTCAAGTTTGGTGAAATCTAACCAAATGTATCACGTATCACCAATTCGTATCACATAAAGATGTGCAACCAATAGAAAATCAATACGTCACAGCGTGACCTCTGAATTCAAAGAACACAATTTTAAACCTCCAGGTTCGCAGCATTGCAGGAAAGTGGAGATGGAGTTTATGGATTGATGTTCTCATACTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU319894 True 319 lncRNA 0.41 1 3265511 3265829

Neighbor

gene id symbol gene type direction distance location
CI01000071_03108610_03108994 NA coding upstream 156517 3108444 ~ 3108994 (+)
CI01000071_03062277_03064334 XBP1 coding upstream 200805 3061838 ~ 3064706 (+)
CI01000071_03016024_03022596 NA coding upstream 242517 3014670 ~ 3022994 (+)
CI01000071_02960341_02966088 COQ5 coding upstream 299065 2960037 ~ 2966446 (+)
CI01000071_02927971_02953988 NA coding upstream 311344 2926649 ~ 2954167 (+)
CI01000071_03329447_03356262 TAOK3A, TAOK3 coding downstream 63618 3329447 ~ 3357152 (+)
CI01000071_03361493_03387786 NA coding downstream 95664 3361493 ~ 3390180 (+)
CI01000071_03414821_03439810 GNB1L coding downstream 148992 3414821 ~ 3439810 (+)
CI01000071_03756518_03756925 NA coding downstream 488927 3754756 ~ 3757404 (+)
CI01000071_03793473_03817709 SEMA4C coding downstream 526889 3792718 ~ 3819100 (+)
G282219 NA non-coding upstream 205 3264822 ~ 3265306 (+)
G282218 NA non-coding upstream 1409 3263809 ~ 3264102 (+)
G282217 NA non-coding upstream 4196 3261100 ~ 3261315 (+)
G282216 NA non-coding upstream 5136 3259976 ~ 3260375 (+)
G282215 NA non-coding upstream 5748 3259391 ~ 3259763 (+)
G282221 NA non-coding downstream 396 3266225 ~ 3266456 (+)
G282198 NA non-coding downstream 9737 3275566 ~ 3277358 (+)
G282161 NA non-coding downstream 37981 3303810 ~ 3317985 (+)
G282169 NA non-coding downstream 176116 3441945 ~ 3442509 (+)
G282080 NA other upstream 208980 3056084 ~ 3056531 (+)
CI01000071_02815324_02834097 NA other upstream 436907 2815127 ~ 2835525 (+)
CI01000071_01374449_01376813 NA other upstream 1887841 1373996 ~ 1377670 (+)
G280443 NA other upstream 2343415 905217 ~ 922096 (+)
CI01000071_00792254_00802384 SLC6A4B, SLC6A4 other upstream 2462194 791346 ~ 803317 (+)

Expression


Co-expression Network