G282564


Basic Information

Item Value
gene id G282564
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000071
NCBI id null
chromosome length 5214881
location 3477997 ~ 3478508 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU320273
TGAAAAGATGGGTCTTGGTCCGCTTCCCAACGAACTCTGGTGCGGTTCAAATGATATATGAACGCAACACGGACCAAAGACATGTAAACGAACAAAAAACAGGAAGATGAGACCCTAAAAAGGACAGAATCCTCACGCATATCGGTTTTTCTCGTCATAGTCGCGAGTTCTATGCCCATCGCAGGCATCAGACGCGCGTCTCCACGCAGCAGATCGTTTGTGTGTGTGACAGAGGGATTCCCGCCGCTGTTTTGACTCCTTTACACATTTTATAAGCTCTTCACAAGTTCCCAGCTGGCCAAAATACCATCATATGCAAGCTACGCACACACAACAAGTGCATTTATCTCAGCACACAACATTGTTTTTGGATGTTCATTAAGTTCCGTCTCAAAATAGGCAATACGTCATAAAATCCGATCAACCAGGTTGTGAAAGTATCCCTATGCCTTTAGGTTCGTATCTTTTGGTTCGGTGATAAAATTGCCAATCTGAACGCTAATCGGACCAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU320273 True 512 lncRNA 0.45 1 3477997 3478508

Neighbor

gene id symbol gene type direction distance location
CI01000071_03414821_03439810 GNB1L coding upstream 38187 3414821 ~ 3439810 (+)
CI01000071_03361493_03387786 NA coding upstream 90119 3361493 ~ 3390180 (+)
CI01000071_03329447_03356262 TAOK3A, TAOK3 coding upstream 120845 3329447 ~ 3357152 (+)
CI01000071_03108610_03108994 NA coding upstream 369003 3108444 ~ 3108994 (+)
CI01000071_03062277_03064334 XBP1 coding upstream 413291 3061838 ~ 3064706 (+)
CI01000071_03756518_03756925 NA coding downstream 276248 3754756 ~ 3757404 (+)
CI01000071_03793473_03817709 SEMA4C coding downstream 314210 3792718 ~ 3819100 (+)
CI01000071_03825614_03840052 NA coding downstream 347106 3825614 ~ 3840217 (+)
CI01000071_03857495_03897333 KAT6A coding downstream 378987 3857495 ~ 3897490 (+)
CI01000071_03901048_03909621 AP3M2 coding downstream 422540 3901048 ~ 3910637 (+)
G282169 NA non-coding upstream 35488 3441945 ~ 3442509 (+)
G282161 NA non-coding upstream 160012 3303810 ~ 3317985 (+)
G282198 NA non-coding upstream 200639 3275566 ~ 3277358 (+)
G282221 NA non-coding upstream 211541 3266225 ~ 3266456 (+)
G282700 NA non-coding downstream 126496 3605004 ~ 3700682 (+)
G282714 NA non-coding downstream 141996 3620504 ~ 3689232 (+)
G282716 NA non-coding downstream 198695 3677203 ~ 3681222 (+)
G282844 NA non-coding downstream 347570 3826078 ~ 3826308 (+)
G282853 NA non-coding downstream 525686 4004194 ~ 4004426 (+)
G282080 NA other upstream 421466 3056084 ~ 3056531 (+)
CI01000071_02815324_02834097 NA other upstream 649393 2815127 ~ 2835525 (+)
CI01000071_01374449_01376813 NA other upstream 2100327 1373996 ~ 1377670 (+)
G280443 NA other upstream 2555901 905217 ~ 922096 (+)
CI01000071_00792254_00802384 SLC6A4B, SLC6A4 other upstream 2674680 791346 ~ 803317 (+)

Expression


Co-expression Network