XLOC_010603 (pimr98)


Basic Information

Item Value
gene id XLOC_010603
gene name pimr98
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 19025023 ~ 19026733 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00020772
TATCTGATCGATGACATGCTGGGTGAAGGATCCTTTGGAACTGTGTACAAGGGGCGACGTCTACACGATGACTTTAAGgtGGCAGTGAAATTTGTCACAAAGACGGAAGATGTGGAATACATATGTATCCCCCTTCCTCTTGAAGTTGCACTTCTCATCCTCGCCCATGGAGTATCCAACGTTCCAGAAATAATACAGCTTCTGGACTGGCAGGACCAGGAAGACCATTATATAATGGTGTTGGAATACCCTTCACCCTGTGAGGACCTATTTGCTTTCACAGAAAGCTATGGAGGATCCATAAGTGAAGGTTTAGCGCAAGTTGTTATGCAGCAGGCAACTCAAGCTGCATACATGTGCTGCCGCCATGGTGTTCTACATCGCGATATCAAACTTGAAAATCTACTGATCAACAAAGAGACTCATAAAGTCAAATTAATAGACTTTGGGTGTGGGGACCTTCTCAAGAAATTACCCTACGATACATTTGCCGGCACCCTTGAGTACTGCCCCCCAGAGTTTGAGGAAACGGGTGAATACAATGGGAAGCCGGCAACTGTCTGGTCCCTTGGCATCCTCTTGTTCGTATTGGTGTGTGGGGACTTTCCCAACACTCAAGAACTGCAAATGATCAATGAGAACAACTACTCCAAAGCTGGCTTGTCCAATGAATGTTGTCAGTTGATTAGTTGCTGTCTCCAGCAAAAGCCTGAGCAGCGGATTAAATTAAGAGAGATTCTTCTCCACGAATGGTTCAAGgacaCCAACCTGGAGAACTGAAGAACAGCCACCCTACATGTTATTGTCTTGAGAGGAACGTTTCAGGCTGTTTGAGGCAGGAAATCTTGAGCAGGAGGTGGCT
>TCONS_00020773
ATGACAAGTCAGGtcaTCAATTCTTGCCACTATCTGATCGATGACATGCTGGGTGAAGGATCCTTTGGAACTGTGTACAAGGGGCGACGTCTACACGATGACTTTAAGgtGGCAGTGAAATTTGTCACAAAGACGGAAGATGTGGAATACATATGTATCTCGGGTTATTCAGAGCCCCTTCCTCTTGAAGTTGCACTTCTCATCCTCGCCCATGGAGTATCCAACGTTCCAGAAATAATACAGCTTCTGGACTGGCAGGACCAGGAAGACCATTATATAATGGTGTTGGAATACCCTTCACCCTGTGAGGACCTATTTGCTTTCACAGAAAGCTATGGAGGATCCATAAGTGAAGGTTTAGCGCAAGTTGTTATGCAGCAGGCAACTCAAGCTGCATACATGTGCTGCCGCCATGGTGTTCTACATCGCGATATCAAACTTGAAAATCTACTGATCAACAAAGAGACTCATAAAGTCAAATTAATAGACTTTGGGTGTGGGGACCTTCTCAAGAAATTACCCTACGATACATTTGCCGGCACCCTTGAGTACTGCCCCCCAGAGTTTGAGGAAACGGGTGAATACAATGGGAAGCCGGCAACTGTCTGGTCCCTTGGCATCCTCTTGTTCGTATTGGTGTGTGGGGACTTTCCCAACACTCAAGAACTGCAAATGATCAATGAGAACAACTACTCCAAAGCTGGCTTGTCCAATGAATGTTGTCAGTTGATTAGTTGCTGTCTCCAGCAAAAGCCTGAGCAGCGGATTAAATTAAGAGAGATTCTTCTCCACGAATGGTTCAAGGTATGA

Function

symbol description
pimr98 Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in negative regulation of apoptotic process; protein autophosphorylation; and regulation of mitotic cell cycle. Predicted to act upstream of or within protein phosphorylation. Predicted to be active in cytoplasm.

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000094999

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00020772 False 862 mRNA 0.46 6 19025023 19026414
TCONS_00020773 True 810 mRNA 0.45 6 19025241 19026733

Neighbor

gene id symbol gene type direction distance location
XLOC_010601 fhod3b coding downstream 64410 18689930 ~ 18960613 (-)
XLOC_010602 CR848057.1 coding downstream 160637 18864270 ~ 18864386 (-)
XLOC_010600 fhod3b coding downstream 372377 18608978 ~ 18652646 (-)
XLOC_010599 FP067425.1 coding downstream 441685 18580724 ~ 18583338 (-)
XLOC_010598 NA coding downstream 523882 18472943 ~ 18501141 (-)
XLOC_010604 CR936240.2 coding upstream 118414 19145147 ~ 19150743 (-)
XLOC_010605 dnah11 coding upstream 154430 19181163 ~ 19373310 (-)
XLOC_010606 CR936240.1 coding upstream 163781 19190514 ~ 19190631 (-)
XLOC_010607 BX005032.1 coding upstream 395562 19422295 ~ 19424133 (-)
XLOC_010608 NA coding upstream 469011 19495744 ~ 19497804 (-)
XLOC_010626 CR392024.2 misc upstream 1868379 20895112 ~ 20895175 (-)
XLOC_010597 AL929304.1 non-coding downstream 652483 18368914 ~ 18372540 (-)
XLOC_010596 NA non-coding downstream 875017 18145417 ~ 18150006 (-)
XLOC_010610 BX005389.2 non-coding upstream 590355 19617088 ~ 19618599 (-)

Expression


Co-expression Network