XLOC_010608


Basic Information

Item Value
gene id XLOC_010608
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 19495744 ~ 19497804 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00021796
CTTCGAGccagcatcttaaaccaatgtcatattgacgtcctGATACTAATTTGtgaggttgtgtggaaagtaaccaaaatgcaacatctgtctgacattggacattgacgtcagcctgactttggtttctgacatcaacccaatttttCATTTCCAATCAAAATGCAATGATCCACAGCAtcggggtacaacatcaatctgacatcacgttgacgtcctgtgccttcTGGGTGTGCAGTTCCGAGCTGTAAACAAAGGTTCAGCCTTCGCACCTTCAGCTAGGTTATCACACGGTGCAAGCAGCAGGGCTTCTTCAGTCGATCTGATTTGCCAGTGCACTTCAAACCCCTCAGAGAACAGCTCAACCCCACTCTGTTCCAGCTGACTGACACATAATGGCTTTTAATAGCCATATTACTTAAAATTACTGGGTCAACAGTAGCAAATGTGTTTCATGGCTCATTAGCCAAAAATGTTAGACAAACAGAGCCTCTATATTTAACATTAGTGAAGATGCAAGAGAAATGTTTTCATGCTGTTGATATGGAGTCTCGCTGAGTCTGATACTGGGGCTTTTTAGAGTAATAAGAAGTTCTTTGTGAATTTGGGTTCATTtcctttgagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcgtgtgtcagtgatttttaaaatgttatgacTGTATATTAATTTAGACTGCCAGGATCTTACCATTTCATAAATTATGTAAAAG

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00021796 True 742 lncRNA 0.41 3 19495744 19497804

Neighbor

gene id symbol gene type direction distance location
XLOC_010607 BX005032.1 coding downstream 71611 19422295 ~ 19424133 (-)
XLOC_010605 dnah11 coding downstream 122434 19181163 ~ 19373310 (-)
XLOC_010606 CR936240.1 coding downstream 305113 19190514 ~ 19190631 (-)
XLOC_010604 CR936240.2 coding downstream 345001 19145147 ~ 19150743 (-)
XLOC_010603 pimr98 coding downstream 469011 19025023 ~ 19026733 (-)
XLOC_010609 abcb5 coding upstream 39234 19537038 ~ 19568795 (-)
XLOC_010610 BX005389.2 coding upstream 119284 19617088 ~ 19618599 (-)
XLOC_010611 BX005389.5 coding upstream 128722 19626526 ~ 19627832 (-)
XLOC_010612 BX005389.3 coding upstream 133610 19631414 ~ 19634470 (-)
XLOC_010613 NA coding upstream 309724 19807528 ~ 19821312 (-)
XLOC_010626 CR392024.2 misc upstream 1397308 20895112 ~ 20895175 (-)
XLOC_010602 CR848057.1 non-coding downstream 631358 18864270 ~ 18864386 (-)
XLOC_010599 FP067425.1 non-coding downstream 912406 18580724 ~ 18583338 (-)
XLOC_010614 NA non-coding upstream 313830 19811634 ~ 19813802 (-)

Expression


Co-expression Network