XLOC_010613


Basic Information

Item Value
gene id XLOC_010613
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 19807528 ~ 19821312 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00021797
GCATGCTTTAGATTCAGGGTTAAGGTCATTGTTTTCTttctttacagtaaaaaaaaataataataataatccttagtcaatgtcatactcatcagctggagctttatttaaaaaaaaaatctatgttctctgctccagccaaaacttgcaggtaccttgcaggtctctagattgcaccatcgtattgttgtttatttatcagttattttgttgctttcTGAGAATGATGATCCATAGACCTTTTAACCCCTCTTTGTTTAGGCCACATGTCGAATCTTAAAAgaagaacacaacaacataaaaatatattatattctttggactgggtaaccttatgcttatgtctgtgccaaataatacaaatacataccaGTACTTTTCAGTAGCAAACAAGCAGGAAAGTTCTTTGAAGGAATCAGGATGAGTTGAAAGGTATTTATTGTGGTTGGCCATCTCTGCCACAAGAATCCACTGCTTCTCCTGAAGAATCCTGACTAGCAGGATGATGTTGAACACCCTCCTTATTGTTGCTGGATCAGCAgagtctgaaatatatttataaaaagaaagtTGTATAACAAGGATTATACGTCAACTTTTAAAGAATCAACACTGACAGAAGTCTAGTGTACATACCATGCCATATGACGAAGACATCCATATCACTTCTGTTGTTTGTTGTCTTTgcttctgctactgaaaaaatgacaataatagtaacaccTACAATTTTTCATGActtcatgtaatattaataagaatttccTCACCCTCTGCCCACTCCTCTACATCACAGACCAAAGTCTTCCAATTGGTTTCCAGTCACTGCCAGTTTCATGGATTCTGTTTTGCAACTTGCTTTGCCAGAGCTGCTGCGGTCTACAGTGATAAGCAATCAAAAATCACAATACTATTCAAATAGGTTATAGAACAACTAAAACAAATTCTACTGGATATTGTTACCTTCTGATATCAATAGGTCAGCGAGATGGCCAAATTGTTGAATATCTGCTAATTCCAGCACATGACCATGAGAGTTACAGTAGCATATCTGGTCACTGCAATCCTATAGAAGAAATATTGCACTGTTCAACCTCCTTCCCAAGAGTAAAACCACACATATCCTTGTATGCCTCACTCCATTTCACCTGGTTAacatatacaaaaacaaacaaacaaacaaacaaacaaataagtaaaccaATAAGTTTTTGCATTTACCTGTAGATCAGTTTAAGATAATCACATAGTTCATCTATGATATAAACTCAGATATAAACTCATGTGCTTAGGCATGAAACACACTAAAATCATGGGCTTAAAGATGGTGCTGAAACTTTGGACAGCTTTTTTCAACTCTTTGGAGGTAGTGTCATTAGTTGATGTAGTCCACAAATCTTCCTGTCAATCCTTAATCCTTAGCTGTAAATAAACCTTCAAAAATGCCATTGTTTGAAAAAGGAATGAAACCGTACAGAACAAGTGCATAAcagtttatatcttctaatcTAATTTTACTAGGTGAACATCACAGAgctgttttcttgttaatttagttacaac

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00021797 True 1563 lncRNA 0.35 2 19807528 19821312

Neighbor

gene id symbol gene type direction distance location
XLOC_010612 BX005389.3 coding downstream 173058 19631414 ~ 19634470 (-)
XLOC_010611 BX005389.5 coding downstream 179696 19626526 ~ 19627832 (-)
XLOC_010610 BX005389.2 coding downstream 188929 19617088 ~ 19618599 (-)
XLOC_010609 abcb5 coding downstream 238733 19537038 ~ 19568795 (-)
XLOC_010608 NA coding downstream 309724 19495744 ~ 19497804 (-)
XLOC_010615 CU855948.1 coding upstream 7064 19828376 ~ 19834469 (-)
XLOC_010616 hdac9b coding upstream 18834 19840146 ~ 20006270 (-)
XLOC_010617 ahr1a coding upstream 190878 20012190 ~ 20038263 (-)
XLOC_010618 BX511151.1 coding upstream 220545 20041857 ~ 20043276 (-)
XLOC_010619 NA coding upstream 328265 20149577 ~ 20152725 (-)
XLOC_010626 CR392024.2 misc upstream 1073800 20895112 ~ 20895175 (-)
XLOC_010607 BX005032.1 non-coding downstream 383395 19422295 ~ 19424133 (-)
XLOC_010621 NA non-coding upstream 488058 20309370 ~ 20312666 (-)
XLOC_010623 CR354600.1 non-coding upstream 572381 20393693 ~ 20393809 (-)

Expression


Co-expression Network