XLOC_010618 (BX511151.1)


Basic Information

Item Value
gene id XLOC_010618
gene name BX511151.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 20041857 ~ 20043276 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00020796
ATGCGGTGTGAGGTGGCGTGCCAGACTGATGTATACACAACTGATGTAGCATGCCAAACCGACGCGGTTATGCCCATCAAACATACCAGCACACAATGCAGTTGGAAACCAAAACAAAGAAGCAAGAGCATCCAGGTTAAACAGCATAAGAAGGATGTTAGCTGTAACGTTAGCACAGTCATGTTGAACACATCGTTCGAAGAACTTCCACTTGCCGTTTCAACCCCTGTAAAAAGGTCAAGAACTACGGCTATAGATGACATTACGTTCAACCCAGATGATACCAACCACACCATCTATAATGAGAGTACTGAAATAGAAACACCACATTACAAAATGAGGAAATTTATAGTTTACGAAGAAAACATCATTGTGCTCTTCAGGCAGTGTCCTATCTGCACCAAAAGATGTGTTATACACAGTAGGACTGTCGGATCTCTTTAATTTGTGGATCAGGTCTGCACACACTGTGAGCATCGTAACACTTGGACCAGTCAGCCGTATGTTGCAGACATACCAGCAGGAAATATCCAGCTGGCCGCAGCTGTAGTTTTTAGTGGAGCGTCCTTCTTGCAAGTGGATAAGGCaaggctatttttatttatatcccTCTGTGACCCTTGTTTTCTGCTGCAGTTTAAGTAATAGTTAATTTTCCATGTGTCCGCAGTTGTTTCAGTTATATAACATTGCAGGGATTAGTCACACGACCTACCTAAAACATCAGCGGAATTTACTTTTTCCAACAATCAATTGGTTGTGGAATATGGAACAAAGTACAGCTGTTCAACATGCAATCACGAATGGAGACACCATCTTTGGCGGGGACATGCGGGCCGACTCTCCAGGTAAGTTTATTAAAGTAATACAACAATATAAAAGCAGTATTATGTAAATTAGttaacaaatgttatttaatcatACTTTTTTAGGACACAGTGCAAAATATGGTACCTATTCTGTGATGGACCTGAAAGCAAACCGAATAGTGGACATTCAGCTTATCCAGGTATTTCAGTGTACTACCAAATGTTATGC
>TCONS_00021798
CCTGCCTCTACAGATTCAGTAagtgtaaatacatgtaaatacatgACTTACTGCAATGACTAGCGTTActaagtattttacagtaattcTTCAATACTACAGACTGTAAACAGTTGGTTTTCATTTAATCGTGTCTGTCCGGTGTCTTTTAGACGGTTGTACAACAGTTATGTTCGCCATCTGAATCAGAAATGCGGTGTGAGGTGGCGTGCCAGACTGATGTATACACAACTGATGTAGCATGCCAAACCGACGCGGTTATGCCCATCAAACATACCAGCACACAATGCAGTTGGAAACCAAAACAAAGAAGCAAGAGTAAGAATTAAATCCATTTCTGTTTGCTGGTCAATGTTGCATTGGCATTTTTAGACTAGCATGTTTTCTTTGTTCAGGCATCCAGGTTAAACAGCATAAGAAGGATGTTAGCTGTAACGTTAGCACAGTCATGTTGAACACATCGTTCGAAGAACTTCCACTTGCCGTTTCAACCCCTGTAAAAAGGTCAAGAACTACGGCTATAGATGACATTACGTTCAACCCAGATGATACCAACCACACCATCTATAATGAGAGTACTGAAATAGAAACACCACATTACAAAATGAGGAAATTTATAGTTTACGAAGAAAACATCATTGTGCTCTTCAGGCAGTGTCCTATCTGCACCAAAAGATGTGTTATACACAGTAGGACTGTCGGATCTCTTTAATTTGTGGATCAGGTCTGCACACACTGTGAGCATCGTAACACTTGGACCAGTCAGCCGTATGTTGCAGACATACCAGCAGGAAATATCCAGCTGGCCGCAGCTGTAGTTTTTAGTGGAGCGTCCTTCTTGCAAGTGGATAAGGCaaggctatttttatttatatcccTCTGTGACCCTTGTTTTCTGCTGCAGTTTAAGTAATAGTTAATTTTCCATGTGTCCGCAGTTGTTTCAGTTATATAACATTGCAGGGATTAGTCACACGACCTACCTAAAACATCAGCGGAATTTACTTTTTCCAACAATCAATTGGTTGTGGAATATGGAACAAAGTACAGCTGTTCAACATGCAATCACGAATGGAGACACCATCTTTGGCGGGGACATGCGGGCCGACTCTCCAGGTAAGTTTATTAAAGTAATACAACAATATAAAAGCAGTATTATGTAAATTAGttaacaaatgttatttaatcatACTTTTTTAGGACACAGTGCAAAATATGGTACCTATTCTGTGATGGACCTGAAAGCAAACCGAATAGTGGACATTCAGCTTATCCAGGTATTTCAGTGTACTACCAA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000117698

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00020796 False 1038 lncRNA 0.41 3 20041857 20043085
TCONS_00021798 True 1297 lncRNA 0.40 2 20041866 20043276

Neighbor

gene id symbol gene type direction distance location
XLOC_010617 ahr1a coding downstream 3594 20012190 ~ 20038263 (-)
XLOC_010616 hdac9b coding downstream 35587 19840146 ~ 20006270 (-)
XLOC_010615 CU855948.1 coding downstream 207388 19828376 ~ 19834469 (-)
XLOC_010613 NA coding downstream 220545 19807528 ~ 19821312 (-)
XLOC_010614 NA coding downstream 228055 19811634 ~ 19813802 (-)
XLOC_010619 NA coding upstream 106301 20149577 ~ 20152725 (-)
XLOC_010620 plekha8 coding upstream 222223 20265499 ~ 20294236 (-)
XLOC_010621 NA coding upstream 266094 20309370 ~ 20312666 (-)
XLOC_010622 chn2 coding upstream 275124 20318400 ~ 20492799 (-)
XLOC_010623 CR354600.1 coding upstream 350417 20393693 ~ 20393809 (-)
XLOC_010626 CR392024.2 misc upstream 851836 20895112 ~ 20895175 (-)
XLOC_010612 BX005389.3 non-coding downstream 407387 19631414 ~ 19634470 (-)
XLOC_010611 BX005389.5 non-coding downstream 414025 19626526 ~ 19627832 (-)
XLOC_010627 NA non-coding upstream 880206 20923482 ~ 20927125 (-)
XLOC_010630 NA non-coding upstream 1036313 21079589 ~ 21083019 (-)

Expression


Co-expression Network