XLOC_010619


Basic Information

Item Value
gene id XLOC_010619
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 20149577 ~ 20152725 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00022143
CtgaactcatttatttatttaatcaaccaTAAAATATACAGGAATCTCTTGTTCCGAATAGAAGGACAGCAGTGGCCATCAACTGCACCAATCACTCTCCTTTATTTCCACAAAAAAAGACTGGTAATAAAAGAAGAGCGATGCAAACAGATTTCTGCTGCCCCCCTCTCAGACGGGAAGCTGTACTGAACAGGTTTCCAGTTTCAATCATTCCAAAACTCAAAAGCATGAAAAGAGACAAACACAGGGGTTTTTTTCTGACAGGCCATCACAGAAGTATCGAGTGGTTTCATTTGCTAATTCAAAGCGAGCAAACCTGCTCAAAAAACGTCATGTTAATAAGAgccagaaaaaatataatatatatttatattcatatatcaaCATACAAAGAGATCAAATGCTGTTCTACCATTGGTTTTTACACAGTGTTCCTCATCCTGGAGCAAAGCATGCTGGGAGCCGTTTGCCTTTCATTTTCAGTGCTTTTTTCACAGATGTAGTGTTGAACTTCTTGTGCATTGTAGAATTTGTTCTCTCGAGCTGCCCCTTCCCTCCATACAGTAATTTATGAAGGCACAAAATGATGATGAAATGcggaaagtaaaaataaataccatAGATAAAAAGAATAATTTATCCTAAAACTGAAGATGGAGAGAGGTGttagctgttttttttgttttgttttaaactcaTGCTTGTGGCCGAAAGCATTACACAACGCTGATGTTCATATCCTCAAATTTCACCTTTGCGCTTTAGAAACTACTCGATTTGTTTTCCCCCTTCGAGAGGGTCAGAGACAGGTATTAAAATCacgtttgtttaaaaaataaatcatttcttTCCCCCAATAGTTGATCAGAAGTGCACACCGACTGAAAACTGTTTGAAAGCACACAAATGTcccagttatgttttgttttgtttttttaaagcgaCTGATTTAAATTATCCCTCAAGATCTGAAAAATTATATATGAATCCGTGTTTGCAATACGACAGTGTCAAACCATCCTGTGCAAAAATATTGGTCCCCAGGCTGCTGATTCCTTGTCTTGTTATTGCCACATCTGGAGGTCCGTCCACCTATTCCTAAAATTTACATAGGGCAAGATGCATTGGCAGAGGTTGAGCTGATGGATGAGGAAGGCCAGCCTGCTGCgccacgtgtatgtgtgtgtgtatgtgtagagACTCTTAAGGCTCTGCGGAGTGGCCGGCCGCTGGGTAATTAAGACAAGATGTGCGCCTCTGCTTTTGTTTACCTCAGTAAGTCTCTGAGTCGGAGTCGTTGAGCTCCTCGTCCTTGTAGAAGCCGTCGTGGCGGCCAATGCTGTTAAAGCTGCAGTAGGAGCTGTGTTCGGAGCGGAGCATTGGTAGGCTGTCGAAGGTGACGCTTTTAGTGGGGCTGGTGTAGTGGTTGATGGCACTGAATGTGAGCGTGGGCACCGAGCCTCCGCCAGGAGAAACTGGCATCATGGTGGCCAGGATGAGCGCCAGGCAATCGGCCACATCTTTGTTAGGAGCGCAAGCCAGGGCCGGAGTGTAGCCTTAGGGAGTACATTTTCATCCACGGCAAGCACACTAGCACCCTTAGCAAGCAGTTCTTG

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00022143 True 1616 lncRNA 0.43 2 20149577 20152725

Neighbor

gene id symbol gene type direction distance location
XLOC_010618 BX511151.1 coding downstream 106301 20041857 ~ 20043276 (-)
XLOC_010617 ahr1a coding downstream 111314 20012190 ~ 20038263 (-)
XLOC_010616 hdac9b coding downstream 143307 19840146 ~ 20006270 (-)
XLOC_010615 CU855948.1 coding downstream 315108 19828376 ~ 19834469 (-)
XLOC_010613 NA coding downstream 328265 19807528 ~ 19821312 (-)
XLOC_010620 plekha8 coding upstream 112774 20265499 ~ 20294236 (-)
XLOC_010621 NA coding upstream 156645 20309370 ~ 20312666 (-)
XLOC_010622 chn2 coding upstream 165675 20318400 ~ 20492799 (-)
XLOC_010623 CR354600.1 coding upstream 240968 20393693 ~ 20393809 (-)
XLOC_010624 creb5b coding upstream 376475 20529200 ~ 20707742 (-)
XLOC_010626 CR392024.2 misc upstream 742387 20895112 ~ 20895175 (-)
XLOC_010614 NA non-coding downstream 335775 19811634 ~ 19813802 (-)
XLOC_010612 BX005389.3 non-coding downstream 515107 19631414 ~ 19634470 (-)
XLOC_010627 NA non-coding upstream 770757 20923482 ~ 20927125 (-)
XLOC_010630 NA non-coding upstream 926864 21079589 ~ 21083019 (-)
XLOC_010633 NA non-coding upstream 1065617 21218342 ~ 21224878 (-)

Expression


Co-expression Network