XLOC_010639 (si:ch211-154o6.2)


Basic Information

Item Value
gene id XLOC_010639
gene name si:ch211-154o6.2
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 21673723 ~ 21692024 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00020839
ATGGAGGACTCGCATTTCAGCTCTTCATACTTCTGGTCTCCTGTGCAGGGGCAGATCGAGAATGCTGTATTTCTCAATAAAGTAAAGGAGCAGCTTGGTCATGACAAAAGCCCCACCTACTCACATGGCCCTGCCCACTATCCCCCTACAGCAGTGGTGGCTGTCGCTGGGGGTCCCATGGAAGCACCGACATCAAGAACACTAAAACAAGAGCATGTGCAACCGTCCCATTCCTCACACAGTATAACAGTGGTGCCGGTACCACCTTCTGGCATCATGACGGcagCGGGTTTGGTCACCCTGGTGTCTCCGGTGTCTTCGGCTCAGTCTCTTATTCCTGGACACCCCTCAATGATAACAGTCCAGACAGACAAGAAAAATGACTCCTTGCCCTGCTCACCGGTCATCATCCCATTACCTTCCAAACGTtgcagaaagaagaaagaaacactcCCGCTAGTTGGCTCTCCTACTGGGACAGATCCCTTGATTTTGGGTCTTTCAGGACAGCATCTTTCTACACACCCTTATAGCCTCTCCCCAGAAGAAGGGCATGCTGGGAAAGAAGGCAGCAAAACATACAGAAACCACACAGAATCCAAACCTCACAAGTGTCCTCACTGCACGAAATCATTTGCCAACTCAAGCTACCTTGCTCAGCATGTGCGAATACACACTGGAGTTAAACCGTACACCTGTAGCTACTGCGAGAAGACCTTCAGACAGCTCAGTCACTTACAGCAACACCACAGGATCCACACAGGAGACAGGCCATACAAATGTACACACATGGGCTGTGAAAAGTCTTTCACTCAGCTCTCTAATTTGCAGTCCCATCGGCGTCAGCACAACAAGGACAAACCATACAAGTGTCACCACTGTAATCGAGGATATGTAGACGCAGCCGGCCTGGATATTCATCTGTCCACGCACACGGTTAAGCATGCTAAGCTGTACTCCTGTGGTTTATGCCACCGCACATATACCTCGGAGACGTATCTAATGAAGCACATGCAAAAACACGCTCCGGATATGCTTCCATCTCCACCTGGATCAAACCAGCATAGTCACAGTCCCGGACGCGCTGGAGGAAGCGGTTCAGAAGGAGACGGGCAGAGCAGAATTGAAAGGAGTGATGTTTTTGTCCAACCGGTCAGTGTGCCGTGTGTGTATGACATGAACCAGTACAAACCAGTACCTGCAGCAGACGTGCAGTACAAAACCGTCAGCGTGTCTGACATCTCCCCTCACAAAGACCTCTGCATCACCGTGGAGGCTTCAGCCATACAGGCGAACCACCTGAACTCTTGA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000089032

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00020839 True 1311 mRNA 0.51 9 21673723 21692024

Neighbor

gene id symbol gene type direction distance location
XLOC_010638 gnl1 coding downstream 5641 21651712 ~ 21668082 (-)
XLOC_010637 ddr1 coding downstream 52774 21547583 ~ 21620949 (-)
XLOC_010636 stk31 coding downstream 133646 21491891 ~ 21540077 (-)
XLOC_010634 mpp6a coding downstream 184082 21442362 ~ 21489641 (-)
XLOC_010635 BX469919.1 coding downstream 222439 21451155 ~ 21451284 (-)
XLOC_010640 cops7a coding upstream 59898 21751922 ~ 21777545 (-)
XLOC_010641 si:ch73-86n18.1 coding upstream 87896 21779920 ~ 21785261 (-)
XLOC_010642 FP015862.4 coding upstream 98580 21790604 ~ 21808355 (-)
XLOC_010643 FP015862.3 coding upstream 108361 21800385 ~ 21803111 (-)
XLOC_010644 dicp3.3 coding upstream 116394 21808418 ~ 21810668 (-)
XLOC_010626 CR392024.2 misc downstream 778548 20895112 ~ 20895175 (-)
XLOC_010633 NA non-coding downstream 448845 21218342 ~ 21224878 (-)
XLOC_010630 NA non-coding downstream 590704 21079589 ~ 21083019 (-)
XLOC_010627 NA non-coding downstream 746598 20923482 ~ 20927125 (-)
XLOC_010623 CR354600.1 non-coding downstream 1279914 20393693 ~ 20393809 (-)
XLOC_010645 FP015862.1 non-coding upstream 130710 21822734 ~ 21823249 (-)
XLOC_010647 NA non-coding upstream 144156 21836180 ~ 21836568 (-)
XLOC_010649 NA non-coding upstream 163272 21855296 ~ 21856351 (-)
XLOC_010653 NA non-coding upstream 268101 21960125 ~ 21990338 (-)

Expression


Co-expression Network