XLOC_010647



Basic Information


Item Value
gene id XLOC_010647
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 21836180 ~ 21836568 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00022154
TTATTGTCGAGATTGCAGTGTTTGCTTCTCCTACTGTGATTATTCTAAAGTTCATCTGTGCAAAAAGAGCTGagaACAAAGGAAGGAATCTAACCATCCAGATGAATTAGCTCTGGTACTAACAATGCTGGAATATATATTCTCTTTAAAAGTACCACATGAGGAATTGAACTTGCCATACCATGCTCAgaatataagtacacccctcacaattcTCTCTTtgtgaattaatatttttaatagtaagcTATACAATATTCTTTCCGCTCCGTCCCAGCTTCTTCCCGCTCCGTCCCATATCTCTCCTTGC

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00022154 True 310 lncRNA 0.38 2 21836180 21836568

Neighbor


gene id symbol gene type direction distance location
XLOC_010646 si:ch73-322b17.4 coding downstream 6586 21827332 ~ 21829594 (-)
XLOC_010645 FP015862.1 coding downstream 12931 21822734 ~ 21823249 (-)
XLOC_010644 dicp3.3 coding downstream 25512 21808418 ~ 21810668 (-)
XLOC_010642 FP015862.4 coding downstream 27825 21790604 ~ 21808355 (-)
XLOC_010643 FP015862.3 coding downstream 33069 21800385 ~ 21803111 (-)
XLOC_010648 si:ch73-34h11.1 coding upstream 15288 21851856 ~ 21853082 (-)
XLOC_010649 NA coding upstream 18728 21855296 ~ 21856351 (-)
XLOC_010650 dicp3.1 coding upstream 45126 21881694 ~ 21888047 (-)
XLOC_010651 setdb1b coding upstream 55243 21891811 ~ 21917361 (-)
XLOC_010652 si:dkey-71b5.7 coding upstream 109523 21946091 ~ 22006996 (-)
XLOC_010626 CR392024.2 misc downstream 941005 20895112 ~ 20895175 (-)
XLOC_010635 BX469919.1 non-coding downstream 384896 21451155 ~ 21451284 (-)
XLOC_010633 NA non-coding downstream 611302 21218342 ~ 21224878 (-)
XLOC_010630 NA non-coding downstream 753161 21079589 ~ 21083019 (-)
XLOC_010653 NA non-coding upstream 123557 21960125 ~ 21990338 (-)
XLOC_010654 NA non-coding upstream 172551 22009119 ~ 22012320 (-)
XLOC_010656 CR855277.4 non-coding upstream 224001 22060569 ~ 22064456 (-)
XLOC_010662 NA non-coding upstream 497724 22334292 ~ 22335517 (-)

Expression



Co-expression Network