XLOC_010649



Basic Information


Item Value
gene id XLOC_010649
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 21855296 ~ 21856351 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00021800
CTCGAGTGTGCATTTACCAAATGACATCAAAATGTAAAAACGTATCCAACAAACATTACGATCCAAGGTTTAAGCTTCCGACTACAACTGAGGATTAAATTCAAGATAATTTACATTATCAACATTAACACCACAGGGAATTCTCTCGAATGGTAGTTACTTGTTTTCTGCTACATTAATTATTCCGTGTCGGGGTGCCACACCAAAAACATTACAGCTTCccaattcaaaacattcagtctttTATTctggttataatcgcaccaaaacgtattaaaaaggtacgtgaattataacagcgcaaacttcatttgtcatttgtttaacccttaaaggctacgtgctgactgactgacaggtgcgtgatgcgtgaggccagcaaacacgacgtagctttcagttagaTTAACAGTTTCCGTAAGTATACTTTATAGTATCTATTGCTCTGCATATTATGATTTATCTAAATAATTTTgcgcacaagcaaagagattgAAATAACGCAATAGGTGTTTAGTAGATCTGTATAAAAAAGGTCTGCCGCGACAGCATGAAAAAATCCTATAGGAAACACAGAGTAA

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00021800 True 581 lncRNA 0.36 2 21855296 21856351

Neighbor


gene id symbol gene type direction distance location
XLOC_010648 si:ch73-34h11.1 coding downstream 2214 21851856 ~ 21853082 (-)
XLOC_010647 NA coding downstream 18728 21836180 ~ 21836568 (-)
XLOC_010646 si:ch73-322b17.4 coding downstream 25702 21827332 ~ 21829594 (-)
XLOC_010645 FP015862.1 coding downstream 32047 21822734 ~ 21823249 (-)
XLOC_010644 dicp3.3 coding downstream 44628 21808418 ~ 21810668 (-)
XLOC_010650 dicp3.1 coding upstream 25343 21881694 ~ 21888047 (-)
XLOC_010651 setdb1b coding upstream 35460 21891811 ~ 21917361 (-)
XLOC_010652 si:dkey-71b5.7 coding upstream 89740 21946091 ~ 22006996 (-)
XLOC_010653 NA coding upstream 103774 21960125 ~ 21990338 (-)
XLOC_010654 NA coding upstream 152768 22009119 ~ 22012320 (-)
XLOC_010626 CR392024.2 misc downstream 960121 20895112 ~ 20895175 (-)
XLOC_010643 FP015862.3 non-coding downstream 52185 21800385 ~ 21803111 (-)
XLOC_010635 BX469919.1 non-coding downstream 404012 21451155 ~ 21451284 (-)
XLOC_010633 NA non-coding downstream 630418 21218342 ~ 21224878 (-)
XLOC_010656 CR855277.4 non-coding upstream 204218 22060569 ~ 22064456 (-)
XLOC_010662 NA non-coding upstream 477941 22334292 ~ 22335517 (-)
XLOC_010663 NA non-coding upstream 506121 22362472 ~ 22368440 (-)

Expression



Co-expression Network