XLOC_010662


Basic Information

Item Value
gene id XLOC_010662
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 22334292 ~ 22335517 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00022156
tctttAAACAGTGTGGTAGTGTGACCGTGTATAGGATAAGTGGTAGTGattgatgttgataacaaccaatcaGGGGCCAGTGCTGCCTATTTTAGAGCCGGTTGGCTGTGTTAGGTGATGTGTCACCTCCAGCCCCGCCTTTCTTGTTCCGCGTTTGTTGACATCTGTTTCAGGTATGTTAGCggttgtgtgtgtctctctctctctctctctctctttcgatTAACGTTTGGATTAATCATCGTGGTTTCATTTTTAGCCTGGTTTTTCGTTGGTTTTCCTGTTGGTTGCCATGGAGTTAATGACTGCCACCCATTCAGCTCGCTTGTAGCATAAATGGAGATGACTAATTCGTAATACATGAGTGTACTACTCCCGGCTTGGTAAGTTTCTTATGTAGAGATTAAAGGGGAATGCTAGCGTGTGATTTTGCAAACAGTAACCGTTTTTGCATGTGCATATCTCTTGTAGGATTCTCCCTCTCTGTCCTGGGCGATTTATAAATAAAGATCTAACATCTGTAACATTACTCCGGTTGTGTTTGAAAGATTCTGCTATCCTGAGATCTCTAGGGGAAAGAACTACTCCTGTTGTTTACTACTGCTGCCTGCTtctactatctgctgctgctacatttactgctgcagttactactagctgctactgctacccgctactactatctgctgctgctacatTTACTGCTGCAGTTACTACTAGCTGCTACTGCTATCCGCTAACTATCTGCTTGCTGCTACTCTACTGTTGCAGTTACTGCTAACTGCTACAACTAACTGTTACCTGCTCTATTTATTGCTGTTGTTACTACGACCTGCTACTACTATCTCCTATTGCTACTGTTATATAATTTGtgatttttgttctgtttggTTGTGTGATTCGGTGTGCAAAAGAGTGAGTTTTGTGTTCTGTGTGAATCTTGCTTTTCTATAGCGAAACTACAGAAGCTGTATTtggtttttcttttcttgtgtttGGTTTGTTGTTGGTTTTACTTTTGTATAATTTATCCCGtatattgattttgattttccTTGCAGGAACTGAGGTCCCATGGGTGCAGGATCTTGAGGTGGTGGTGGTGTCACTGCACTTGACATTTTTGCTGTGGACGGTTTGGGAAGTGTGGAGTGTGTGGAtctagtgtggtgtgtgtgtgtggaagtgtgcTTTTTGAACACAACGGAGCACTGGTGATTCTCCCC

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00022156 True 1226 lncRNA 0.43 1 22334292 22335517

Neighbor

gene id symbol gene type direction distance location
XLOC_010661 si:dkey-92i15.4 coding downstream 31162 22295662 ~ 22303130 (-)
XLOC_010660 aqp10a coding downstream 40027 22288777 ~ 22294265 (-)
XLOC_010659 atp8b2 coding downstream 82835 22236961 ~ 22251457 (-)
XLOC_010658 LO017682.1 coding downstream 108997 22199510 ~ 22225295 (-)
XLOC_010657 il6r coding downstream 139892 22177254 ~ 22194400 (-)
XLOC_010663 NA coding upstream 26955 22362472 ~ 22368440 (-)
XLOC_010664 tuft1a coding upstream 28183 22363700 ~ 22385705 (-)
XLOC_010665 si:dkey-238m4.4 coding upstream 142644 22478161 ~ 22483013 (-)
XLOC_010666 NA coding upstream 176465 22511982 ~ 22515521 (-)
XLOC_010667 cgna coding upstream 185195 22520712 ~ 22585309 (-)
XLOC_010626 CR392024.2 misc downstream 1439117 20895112 ~ 20895175 (-)
XLOC_010656 CR855277.4 non-coding downstream 269836 22060569 ~ 22064456 (-)
XLOC_010654 NA non-coding downstream 321972 22009119 ~ 22012320 (-)
XLOC_010653 NA non-coding downstream 343954 21960125 ~ 21990338 (-)
XLOC_010649 NA non-coding downstream 477941 21855296 ~ 21856351 (-)
XLOC_010647 NA non-coding downstream 497724 21836180 ~ 21836568 (-)
XLOC_010675 NA non-coding upstream 559159 22894676 ~ 22989262 (-)
XLOC_010676 NA non-coding upstream 681440 23016957 ~ 23019603 (-)
XLOC_010677 CT030031.1 non-coding upstream 1000011 23335528 ~ 23337596 (-)

Expression


Co-expression Network