XLOC_010673 (lenep)


Basic Information

Item Value
gene id XLOC_010673
gene name lenep
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 22779229 ~ 22781446 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00020889
GAGGAATTAGAGATGAACAAAAGCTAGATGAGAGATGCTGTGAAGCCATTGTTGTGCAATAGCAGGTCGACAGTCAGCCAGCGTTTTCCAGAGCTGAATAAAACCCATTTCACGGGGGCACCGAGTCCACGAATCCGCAGAGCTTCAGGACTTTCGTGTGAAGAGCAGCTCCAGCTGAAGCAAACCGTGGAGACGCAGAACGCGCAGACGCGGCACAGTAGCTCCGGGCCCGCGCTCCTCCATCTCCTCCCGCCGAACATCGCTCGCGCTCTCCGGTCGACGCTGCAGCGGTGGAGGGAGATGCAGCCTCAGCGGCCGCTGCCCCAGGCTATGCCCTCCTCACCGGGCCGAAACCTCGGAGACGCGGCCCTCGGGACGGGCACTGGGAAGAGACTGCTGGGGGGAAATATGGCTTATGGGGTCATCCAATCGCTGAAAGAGTGCCTGTACTTCCTGCTCTGCTGCTGGTGTATTAAAGAGATCTTGGACTGATGGAGAACTCACAGAGCCGTTGAGCCAGTGGATGATTCATCACAAAGATGTGTTGATGCTTCGGCCTGAATCCAGATCTTTTCACGcatgcataaacacacatgcTTCATTAGCCTTCTGTTACTAATGCACTTTAAAGCAGCACATTCACATAGACAACATCTCTTTCAACATGGTGTAGAAATTGAAAACTgtgcaattaataataaaatcaaactgTTTGTGAA

Function

symbol description
lenep Orthologous to human LENEP (lens epithelial protein).

GO:

id name namespace
GO:0007275 multicellular organism development biological_process

KEGG: NA

ZFIN:

id description
ZDB-GENE-060130-3 Orthologous to human LENEP (lens epithelial protein).

Ensembl:

ensembl_id ENSDARG00000095553

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00020889 True 719 mRNA 0.52 2 22779229 22781446

Neighbor

gene id symbol gene type direction distance location
XLOC_010672 pbxip1b coding downstream 3701 22750174 ~ 22775528 (-)
XLOC_010671 tlr19 coding downstream 32104 22737481 ~ 22747125 (-)
XLOC_010670 tlr19 coding downstream 49738 22722352 ~ 22729491 (-)
XLOC_010669 si:ch211-105c13.3 coding downstream 66037 22695211 ~ 22713192 (-)
XLOC_010668 s100t coding downstream 95843 22681818 ~ 22683386 (-)
XLOC_010674 shc1 coding upstream 408 22781854 ~ 22863603 (-)
XLOC_010675 NA coding upstream 113230 22894676 ~ 22989262 (-)
XLOC_010676 NA coding upstream 235511 23016957 ~ 23019603 (-)
XLOC_010677 CT030031.1 coding upstream 554082 23335528 ~ 23337596 (-)
XLOC_010678 si:dkey-247k7.2 coding upstream 557616 23339062 ~ 23346095 (-)
XLOC_010626 CR392024.2 misc downstream 1884054 20895112 ~ 20895175 (-)
XLOC_010666 NA non-coding downstream 263708 22511982 ~ 22515521 (-)
XLOC_010663 NA non-coding downstream 410789 22362472 ~ 22368440 (-)
XLOC_010662 NA non-coding downstream 443712 22334292 ~ 22335517 (-)
XLOC_010656 CR855277.4 non-coding downstream 714773 22060569 ~ 22064456 (-)
XLOC_010654 NA non-coding downstream 766909 22009119 ~ 22012320 (-)
XLOC_010681 CR533578.4 non-coding upstream 741815 23523261 ~ 23523375 (-)
XLOC_010682 CR533578.2 non-coding upstream 811018 23592464 ~ 23592599 (-)

Expression


Co-expression Network