CI01000075_00293769_00296813


Basic Information

Item Value
gene id CI01000075_00293769_00296813
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000075
NCBI id null
chromosome length 1642109
location 293769 ~ 297085 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000075_00293769_00296813.mRNA
ATGCCATCTCACCGCAGAGAGCTCATGCCTCAGCTGGCCTGGATGGAGGTTGGAAAAATAACGGGAGAGAAGAAGACAAGAGGTCAAGGACTGGGCAGAAAACCTTCAGCAGTGAGTCCAGAGGACAACGAGGAGCAGACGCCTTTCGAGAGAGCCGTCTATGACCTCGGACACAAGCAGAAGCTTGTCGATGACCTCACCTTCGGCAGACGGATCGGCTTCTACGAGCTGCGTGGGGAAATAGGCAACGGAAACTTCTCCCAGGTCAAACTCGGCATTCACGACCTGACCAAAGAAAGGGTTGCTGTTAAGATCCTGGATAAGCTGCGTTTGGACAAGCGCTCACAGAGGTTGTTCTCGTCTGAGATACTATGCATGGAGAGACTGTCCCACCCCAACATCGTGCGTCTGTATGAGGTGGTGGAAACCTTTCGCCGGCTTCATCTGGTGATGGAGTACGCACCTGGAGGAGAGCTGTTCTCCAGGATCGCCACCAGAGGACGCCTGTCTGATCTGGAGACTAAACTGGTCTTCTCTCAGATACTGTCTGCTGTGAAACACATGCATGACAACAACATCATCCACCGGGACCTGAAGGCTGAAAATGTCTTCTACACCACCACATACTGCATCAAGGTGGGCGACTTTGGTTTCAGCGCTGAATGCAAACCCACCGACATTCTCACCACCTTCTGCGGCTCTCCGCCCTACGCGGCCCCTGAACTCTTTCGGGACAAGGGTTACATCGGACCACTGGTGGATATTTGGGCTCTGGGCGTCCTGCTGTACTTCATGGTGACGGCCACGTTTCCCTTCAACGGCTCTAGCATGAGAAGACTTCGCTTCTGTATCCTCAGGGGTTCCTACGCCATTCCCACCTATGTCCCTGATGTCTGCCAGTATGTTATCAAGGGCGCACTGAGGCTCGTTCCTGCCGACCGCATTTCCCTGTCGCAGATCATGTCCAGCACTTGGCTGAGGGGAATTGAGTACCCGCAGCCGTACCCACCTGCTTTGCCCACACCGGCGCACCTGGCTGACCCCTCACGGACGCTTTCTAGTGATGAGCACTCGGTCAAGCTCGCGCTCGAGGAGCTGGGCATCACCGAAATTCACCTGAGGAACAACGTGGTGTTGGACTGCCGTAGCCCACTGACAGGGATTTACCGGATACTTCTGCACCGAAACCAGAGGAACAGATCCGGAGAATCTGCGGGATATGCAACGCTCTGTCCCTCCAACACCCGCCTCGGCAGGAGATGCTGGTCTCACCCTACGACCATCTACAGGAAAGAAGAGCAGTCCGCGTTCTGTGCCATCCTATAGACAATGTAAAGAAACAGACAGAGAAATATGATTGATTGGTTGGGTCTTCTTTTGTTCTTGTTGAAAATTTTAAGTCTTTATGAGCTATTTAATGTGTTAAGTGTTCATTAATTGCATGCCAAGCTAAATTAATAAATTTTAATATGTGTTGGTGCATAATAATAATAACAGCATTGACAGTAACACGGTTGAGTTTTACTGTATAATTTTATATTACAAGCCTTTATCAATCAGCATTTATCATTTACTGTAAAAATTGTATTATTTGATAA

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000075_00293769_00296813.mRNA True 1598 mRNA 0.50 3 293769 297085

Neighbor

gene id symbol gene type direction distance location
CI01000075_00257233_00263578 RAB8A coding upstream 29813 257233 ~ 263956 (+)
CI01000075_00252158_00255198 NA coding upstream 38563 252158 ~ 255206 (+)
CI01000075_00216589_00224690 RX2 coding upstream 68911 216129 ~ 224858 (+)
CI01000075_00190821_00197570 CPLX4C coding upstream 95860 190566 ~ 197909 (+)
CI01000075_00110314_00117133 NA coding upstream 176502 110028 ~ 117267 (+)
CI01000075_00500237_00500551 NA coding downstream 202624 499709 ~ 500672 (+)
CI01000075_00548373_00566336 ACSS2L coding downstream 251288 548373 ~ 566483 (+)
CI01000075_00656048_00662437 NAPG coding downstream 358924 656009 ~ 663751 (+)
CI01000075_00682733_00683937 NA coding downstream 385398 682483 ~ 685507 (+)
CI01000075_00800884_00806063 NA coding downstream 503695 800780 ~ 806474 (+)
G288711 NA non-coding upstream 46703 244902 ~ 247066 (+)
G288735 NA non-coding upstream 54687 238869 ~ 239082 (+)
G288694 NA non-coding upstream 71914 149450 ~ 221855 (+)
G288754 NA non-coding downstream 6893 303978 ~ 304246 (+)
G288755 NA non-coding downstream 8023 305108 ~ 316301 (+)
G288773 NA non-coding downstream 27260 324345 ~ 328337 (+)
G288757 NA non-coding downstream 33419 330504 ~ 336468 (+)
G288781 NA non-coding downstream 69970 367055 ~ 367296 (+)
G288708 NA other upstream 56498 235398 ~ 237271 (+)
CI01000075_00917306_00921588 NA other downstream 620416 917306 ~ 922416 (+)
CI01000075_01364135_01365758 EEF2B, EEF2L2, EEF2.2, EF2, EEF2 other downstream 1031701 1364122 ~ 1365843 (+)
CI01000075_01404076_01444348 UNC13A other downstream 1086958 1404076 ~ 1444410 (+)
G289319 NA other downstream 1303096 1600181 ~ 1605306 (+)

Expression


Co-expression Network