CI01000075_00500237_00500551


Basic Information

Item Value
gene id CI01000075_00500237_00500551
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000075
NCBI id null
chromosome length 1642109
location 499709 ~ 500672 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000075_00500237_00500551.mRNA
GTTTAAAAAGGCAGCATACATTATTATCCTGCATTTGAAATAACGTGCACTGAAAAGGTTGCATTAGACGGTTAGTTTTACTTCTTGTGTATTTTCCCAAAGCAAAACTATACTAAAGTCGTCTGCCCTTCCCATGTCTAACATCATCCGTTTGAGATTTCACCCAACTCCACAGCGGAACCCAAAAATGAAAAATTCAACACCAGGAAACAGCGTTCATTGTTTAGTGTGCACTCTAGGTAGTCGTCAACATTAATATTTCATGGGTTTATTCCTTCTGAAGTTCTTTGTTATCATGAAATCCCTCACATTCACAGGCCTAGCATCACGGAGAGACGTCAAACACTCTAAGGAGGCAAAGACAGCTTTCTGCCCCAGAAACGAACTCCGCAGTCACGATTACAATACGTTGTTTACATCACCCGAGTCACAAAATAACAAATCAAGGTTATTCTGGAAGTACACGGATGGAGGATTGTACCAGTGCATGCAAACTGCCAACTATTTCAGTGAACTTTGGGGAGGCAAATGACTAGGTTTATTCCTGCCTCCGAGACACGAGACGAAGGCAAAAACAGGCACACAGAAAGACAGGGGCCGGAGCCAGGGAATGGAAACACAAACAGAGTGCTCGAAACCCTCCAGCGTGTGACCTCGGACTGCCGTCTCTACTGGGACACCGGCAGTGGAACGACTGACAGGCCTGATTTATTCTCCCACCAGCCTGACCAACAAACCACCCAGTGTGGCATCACCACGTCTACAACTGCACAGGGCAGCATTACGGCTTTGTGTGTCCTCTTGACCCCGACACGGACAAATAAACTACAGGAACGGCTTTAGAAAAGGGGAAAAAGGGAACGAATATTATAAACCGGATTATTCCAATATTGGACATCGTTTTAATTCTATATTAATGTGGTAAGTCAAGGATCATTAGTGTGTATTTCACTCGCATTTGGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000075_00500237_00500551.mRNA True 964 mRNA 0.44 1 499709 500672

Neighbor

gene id symbol gene type direction distance location
CI01000075_00293769_00296813 NA coding upstream 202624 293769 ~ 297085 (+)
CI01000075_00257233_00263578 RAB8A coding upstream 235753 257233 ~ 263956 (+)
CI01000075_00252158_00255198 NA coding upstream 244503 252158 ~ 255206 (+)
CI01000075_00216589_00224690 RX2 coding upstream 274851 216129 ~ 224858 (+)
CI01000075_00190821_00197570 CPLX4C coding upstream 301800 190566 ~ 197909 (+)
CI01000075_00548373_00566336 ACSS2L coding downstream 47701 548373 ~ 566483 (+)
CI01000075_00656048_00662437 NAPG coding downstream 155337 656009 ~ 663751 (+)
CI01000075_00682733_00683937 NA coding downstream 181811 682483 ~ 685507 (+)
CI01000075_00800884_00806063 NA coding downstream 300108 800780 ~ 806474 (+)
CI01000075_00821649_00821906 NA coding downstream 320977 821498 ~ 825595 (+)
G288793 NA non-coding upstream 20223 474588 ~ 479486 (+)
G288805 NA non-coding upstream 44723 453493 ~ 454986 (+)
G288762 NA non-coding upstream 53832 445544 ~ 445877 (+)
G288789 NA non-coding upstream 91361 393133 ~ 408348 (+)
G288764 NA non-coding upstream 124038 374475 ~ 375671 (+)
G288838 NA non-coding downstream 73613 574285 ~ 577188 (+)
G288870 NA non-coding downstream 93456 594128 ~ 600437 (+)
G288905 NA non-coding downstream 225899 726571 ~ 726815 (+)
G288918 NA non-coding downstream 288099 788771 ~ 826689 (+)
G288755 NA other upstream 191788 305108 ~ 316301 (+)
G288708 NA other upstream 262438 235398 ~ 237271 (+)
CI01000075_00917306_00921588 NA other downstream 416829 917306 ~ 922416 (+)
CI01000075_01364135_01365758 EEF2B, EEF2L2, EEF2.2, EF2, EEF2 other downstream 828114 1364122 ~ 1365843 (+)
CI01000075_01404076_01444348 UNC13A other downstream 883371 1404076 ~ 1444410 (+)
G289319 NA other downstream 1099509 1600181 ~ 1605306 (+)

Expression


Co-expression Network