CI01000075_00548373_00566336 (ACSS2L)


Basic Information

Item Value
gene id CI01000075_00548373_00566336
gene name ACSS2L
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000075
NCBI id null
chromosome length 1642109
location 548373 ~ 566483 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000075_00548373_00566336.mRNA
ACTGACATCTATCCCAACACAGATCATAGAAATTGTGAAATGTCACCTGTTTCAGACTCCACCAACACGGTTGTTCCAGGGACCCAGGAGCCAGAGGAGAAGATATACCATCCACCTGACGGCCTGTTCACAGATGCACACATGCCAGACTTCAATGCGTATCTTGCACTATACAAGAAGTCTACAGAACATCCTGAAGAGTTCTGGGGGGATGTTGCTCAAGAGTTTTACTGGAAGAAGCCCCCGTCAGGGCAGATGATGCAGTATAACTTTGATGTCACCAAAGGGGACATTTACATCAAGTTCATGGAGGGAGCAAAAACCAACATTTGCTACAATGTCCTTGACCGGAATGTGCATGAGAGGAACCTGGGAGAGAAAGTGGCTTACTACTGGGAGGGAAACTCCCCTGATCATCACCTGACCATCACCTACAACCAGCTGTTGAGAAACGTGTGCCGATGTGCCAATACATTAAAGCTGTTGGGTGTGAAGAAGGGGGACAGAGTCGCCATCTACCTACCCATGATTCCAGAGCTGGTGTACACAATGCTGGCCTGCGCTAGAATCGGGGCTGTTCACTCTATAGTGTTTGCCGGTTTCTCGTCTGAGTCTCTGTGTGAGAGGATCATGGATGCTCAGTGCAACATCCTGGTAACAGCAGATGGTGTTTACAGAGGTGACAAGCTGATCAATCTGAAGAAGGTTGCGTCTGAAGCTCTGCAGCGCTGTAAGGAGAGCATGGCCTTGTCTGTTCAGAAGTGTGTGGTGGTCAGACATCATGCCTTCATAACAAACAATGATGCTTCCAACAAACTACAGGGGGTCGTCCACACCATCACCGGCTATATGCTCTACACATCACTGACCTTCAAATATGTTTTCGATTATCACCATGACGACGTTTACTGGTGCACTGCAGACATTGGCTGGATAACAGGCCACTCCTACATCACGTACGGCCCATTAGCCAATGGCGCGACCAGCGTGCTCTTTGAAGGTGTCCCGGTTTACCCTCATGTGGGCCGACTGTGGGAGATCATTGAGAAGTACGGAGTCTCCAAGTTCTACACTGCGCCCACTGCTATAAGACTACTGATGAAATACGGCAGAGAACCACTGCAGCGGTTTGACCTGTCCAGCTTGCGTGTGTTGGGTACGGTCGGTGAGCCCATAAACCCGGAGGCTTGGCTTTGGTATTATGAAGTTGTGGGTCAGCAGCGCTGTCCGGTTATCGACACCTTCTGGCAAACAGAGACGGGTGGCCATGTTTTGACCCCTCTTCCAGCTGCTACACCACTGAAGCCTGGGTCTGCTACATGCCCATTTTTTGGAGTCCAGCCTGCCATTCTCAATGAACACGGAGAAGAATTAGAAGGGGAGGCGGAGGGATACCTGGTTTTCCGGAAGCCCTGGCCGGGAATCATGAGGGGTGTGTATGGGAATCAGGAGCGCTTCGAGAGCACCTACTTCCAAAAATTCCCAGGATTCTATGTGACAGGAGATGGCTGCAGGCGGGACAAGGACGGATATTACTGGATCACCGGCCGGATCGACGACATGCTGAATGTCTCTGGTCATTTGTTGAGCACAGCTGAAGTAGAGGCGGCTCTGTCTGAACACCCATCGGTCGCTGAAGCTGCAGTCGTCAGTCGTCCTCATGCAGTGAAGGGAGAGTGTCTGTACTGCTTCATCACGCTGAAAGAGCAGAAAGAGTTCAACCGTGCGCTGATGGAGGAGCTAAAGAGGAAAGTGAGGGAGAAGATCGGACCAATAGCCACCCCAGATTTCATCCAGAATGCTCCAGGGCTTCCCAAAACACGTTCAGGTAAGATAATGCGGAGAGTTCTGCGACAGATCGCACGCAACGAAAAAGACCTGGGTGACCTCTCAACCCTGGCCGACCCCAAGGTCGTGGAGGTGCTGTTCAGCCAAAGATGTGAGGCGGCGGCGTGAGCGCAGCTCTTTTCCATGCTGGGACACCGCATTCGCCCTGTGTGCATTAAAGACTTTGGGTTTGGGCTCAGAAAGGGCACTGGTTCTCCTAAATCTGATCTGAAGGGTGTAACTCTGCCCAGAATTAAGGTAAAACAAACAAACAAA

Function

symbol description
acss2l Predicted to enable AMP binding activity; ATP binding activity; and acetate-CoA ligase activity. Predicted to act upstream of or within acetyl-CoA biosynthetic process from acetate.

GO:

id name namespace
GO:0016208 AMP binding molecular_function

KEGG:

id description
K01895 ACSS1_2, acs; acetyl-CoA synthetase

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000075_00548373_00566336.mRNA True 2103 mRNA 0.51 17 548373 566483

Neighbor

gene id symbol gene type direction distance location
CI01000075_00500237_00500551 NA coding upstream 47701 499709 ~ 500672 (+)
CI01000075_00293769_00296813 NA coding upstream 251288 293769 ~ 297085 (+)
CI01000075_00257233_00263578 RAB8A coding upstream 284417 257233 ~ 263956 (+)
CI01000075_00252158_00255198 NA coding upstream 293167 252158 ~ 255206 (+)
CI01000075_00216589_00224690 RX2 coding upstream 323515 216129 ~ 224858 (+)
CI01000075_00656048_00662437 NAPG coding downstream 89526 656009 ~ 663751 (+)
CI01000075_00682733_00683937 NA coding downstream 116000 682483 ~ 685507 (+)
CI01000075_00800884_00806063 NA coding downstream 234297 800780 ~ 806474 (+)
CI01000075_00821649_00821906 NA coding downstream 255166 821498 ~ 825595 (+)
CI01000075_00864628_00867240 NA coding downstream 297546 864029 ~ 868077 (+)
G288793 NA non-coding upstream 68887 474588 ~ 479486 (+)
G288805 NA non-coding upstream 93387 453493 ~ 454986 (+)
G288762 NA non-coding upstream 102496 445544 ~ 445877 (+)
G288789 NA non-coding upstream 140025 393133 ~ 408348 (+)
G288764 NA non-coding upstream 172702 374475 ~ 375671 (+)
G288838 NA non-coding downstream 7802 574285 ~ 577188 (+)
G288870 NA non-coding downstream 27645 594128 ~ 600437 (+)
G288905 NA non-coding downstream 160088 726571 ~ 726815 (+)
G288918 NA non-coding downstream 222288 788771 ~ 826689 (+)
G288755 NA other upstream 240452 305108 ~ 316301 (+)
G288708 NA other upstream 311102 235398 ~ 237271 (+)
CI01000075_00917306_00921588 NA other downstream 351018 917306 ~ 922416 (+)
CI01000075_01364135_01365758 EEF2B, EEF2L2, EEF2.2, EF2, EEF2 other downstream 762303 1364122 ~ 1365843 (+)
CI01000075_01404076_01444348 UNC13A other downstream 817560 1404076 ~ 1444410 (+)
G289319 NA other downstream 1033698 1600181 ~ 1605306 (+)

Expression


Co-expression Network