CI01000075_00656048_00662437 (NAPG)


Basic Information

Item Value
gene id CI01000075_00656048_00662437
gene name NAPG
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000075
NCBI id null
chromosome length 1642109
location 656009 ~ 663751 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000075_00656048_00662437.mRNA
CCATAAAATGATTGTGTTTTATGCAGCTTAAAGACCAGCATGACCAAGTGGAAACCTGATTATGATGGAGCAGCTTCAGAGATGGCAAAAGCAGCTAAAATTCACAGACTCTTCCATGCAGCAAAAGCATATGAACAAGCCGGCATGATGTTGAAGGACATGAAGAAGATGCCTGAGGCCATCCAGCTGATAGAGAAGGCCAGCGTCATGTACGTGGAGAACGGCACCTCTGGCACTGCTGGAATAGCCTTGGACAGGGCTGGGAAACTCGTTGAATCGATTGATCTGGAGAAAGCCGTGGACTTGTACCAGAAGGCCGCATCTGTGTTTGAGAATGAAGATCGTCTCAGACAGGCCGCAGAGCTTCTGGGTAAATCGTCCAGACTTCTGGTGAGACTGCGCAGGTTGGACGAGGCCGCTGTGTCCCTCCAAAAAGAGAAGAACATGTACAAGGAAATTGAGAACTACCCCACCTGCTTTAAGAAAACCATTGCTCAAGTGCTGGTCCATCTCCACCGAGGTGACTTTGTTGCTGCAGACAAGTGTGTCAGAGAAAGTTACAGTCTCCCAGGGTTCAGTGGGAGTGAGGACTGCGTTTCTATGGAGACGTTACTGGCGGCTTATGACGAGCAGGACGAGGATCAGTTGGCACGCGTGTGCAACTCACCTTTACTCAAGTACATGGACAATGATTATGCCAAGTTGGCCATCTCTCTGAGGGTGCCGGGTGGAGGTGGCGGGAAGAAGAAGAAACCTCCTGTTGCTCCTCAAGAGGGCAGCGCTGGACCACCAGCTGAGGAAGATGACGATTACGAGGGTGGTTTGTGTTAACTGAGAGAACGGCCTGACTATCCGTGTGTGTGTGTGTGTGAGTGAGCGAGCATCTTAGTGTTTCCTTCCTTTGTGCAATGTGGAGTCATTCCTGAGGAATTCTCTTCCTGTGGGAGGGTCCAGTTTTCTGTGCGTTTACACATCAGACACACAGAAACGCTTGCAAACACAGGCTGTGGACATCAGTTTAACATATTTAATACAGAAGAGGTTCATTTCTTTGCCACTATCTGCACCAAATGGAATAGAGAAATGCAGTGATGACAAATTTTTGTAGTTCGCATCACAAAAACCTAACAGGATTTTTCCACTGGCTTTTGGATTATTGCAAAAAATAAGCTCTGTGACCAACAAAAGTTTATGATTCTACACGTTTAGTTCATCATGGTAATCTTCACAAATGATCACACCTTTTATGAATTTTGAAGCCTAAACAATCACCAGAAGTAAAAAGCTAAAAGTAGGCTATAGCCAGGTCAAAACCCGCCCAATTGCTACTCAAAATTAGCCCAAAACTAGTCCAATGGCATTTCAGGGGGGTCCCCTGGTAACAGTTGCTTTCCGGGGGTAAAATCAGCTTTTTGGCAGGGTTCCTCTCATAAAATTTGCGTTCCAGAGGATCAATATCATGTTATTTGGGGTCGCTTCAACCCGTGGACATGAAAAACAACCCGCAACAACAATGTTAAAGTAGCCAAATTGCAAACTGCAGACTTGGCAACACTGGCTTTAAACGAACAACACTATGGACGCATGACTTCAGCGTCACAATCACTAAGCTACAACTCTTTCAGTCTTTATTTAAAAACATTTTCCCTGAAAGTTTGAGTTGGAATAGTTTGCAAGAGTGCGATTATAAACACAATGAGGCTGTGAAAGCGACTAGCGACCGTGATGATGTTTAATGTTCCCAACAACATCTGTAGTCTCTCATTTAGCCACTTGTAAGCAAAGTAAAAACTTTAAAAAGATCACTGATGTATTTTATGTCTTAGAATAAAATGTGAAAATATCTTGTGTTCACCACAGACCTTATTTCAGGCATTTAACCGAAAACCCATTCAAAAAACCCAGTGACTCTAGTGACTTGTTTTCATGTTTTGGCATACAAAAATTCATCATCCCTGTTGCTCTCTATTGACTGCAGTGTTTTTAAGCAAGTTACAAACACTCATCTTCTATTGGTCAAACAAACAGATAGTCCCGCCCTAAAACTCACATCATTGGTTGAACCAGTGTTCCACTCAGTTGAACCGCTTGAAATATCATTTCGATGCTGCTAGTGGTGCAGAAATATAAAGACAGTCTTAGATA

Function

symbol description
napg Predicted to enable soluble NSF attachment protein activity and syntaxin binding activity. Predicted to be involved in intracellular protein transport. Located in mitochondrion.

GO:

id name namespace
GO:0006886 intracellular protein transport biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000075_00656048_00662437.mRNA True 2145 mRNA 0.44 10 656009 663751

Neighbor

gene id symbol gene type direction distance location
CI01000075_00548373_00566336 ACSS2L coding upstream 89526 548373 ~ 566483 (+)
CI01000075_00500237_00500551 NA coding upstream 155337 499709 ~ 500672 (+)
CI01000075_00293769_00296813 NA coding upstream 358924 293769 ~ 297085 (+)
CI01000075_00257233_00263578 RAB8A coding upstream 392053 257233 ~ 263956 (+)
CI01000075_00252158_00255198 NA coding upstream 400803 252158 ~ 255206 (+)
CI01000075_00682733_00683937 NA coding downstream 18732 682483 ~ 685507 (+)
CI01000075_00800884_00806063 NA coding downstream 137029 800780 ~ 806474 (+)
CI01000075_00821649_00821906 NA coding downstream 157898 821498 ~ 825595 (+)
CI01000075_00864628_00867240 NA coding downstream 200278 864029 ~ 868077 (+)
CI01000075_00877796_00880322 NA coding downstream 214045 877796 ~ 880444 (+)
G288870 NA non-coding upstream 55572 594128 ~ 600437 (+)
G288838 NA non-coding upstream 78821 574285 ~ 577188 (+)
G288793 NA non-coding upstream 176523 474588 ~ 479486 (+)
G288805 NA non-coding upstream 201023 453493 ~ 454986 (+)
G288762 NA non-coding upstream 210132 445544 ~ 445877 (+)
G288905 NA non-coding downstream 62820 726571 ~ 726815 (+)
G288918 NA non-coding downstream 125020 788771 ~ 826689 (+)
G288948 NA non-coding downstream 208647 872398 ~ 872855 (+)
G288755 NA other upstream 348088 305108 ~ 316301 (+)
G288708 NA other upstream 418738 235398 ~ 237271 (+)
CI01000075_00917306_00921588 NA other downstream 253750 917306 ~ 922416 (+)
CI01000075_01364135_01365758 EEF2B, EEF2L2, EEF2.2, EF2, EEF2 other downstream 665035 1364122 ~ 1365843 (+)
CI01000075_01404076_01444348 UNC13A other downstream 720292 1404076 ~ 1444410 (+)
G289319 NA other downstream 936430 1600181 ~ 1605306 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_016945 napgb coding NC_007113.7 CM002886.2 54364273 ~ 54387550 (-)