CI01000075_00682733_00683937


Basic Information

Item Value
gene id CI01000075_00682733_00683937
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000075
NCBI id null
chromosome length 1642109
location 682483 ~ 685507 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000075_00682733_00683937.mRNA
GCATATATGACCTTAACATTTTAAAGCAAGCAAATAACTACATTGAAACAGGTAAATAGCAATATCAATATCAATATCCAAAACAACATGAAGGTTGAGATAGAGGGGTACGTGACCAGGAAGTGTCCCTGCATAAAGCAGAAGAAACCCACTGCACACTTCCGAGCGCCTATGGGTTGTATCACGACGCACTCACCTATGGAGCTGGTGTGTATAGACTACCTCCACTTGGAGCCGAGCCGAGGAGGATATGAGTATATCCTGGTGGTCATTTCACCATGTTCGCCCAAGCCTACCCAACTACAAAGAATTCAGGCTAGACTGCAGCAGAGTGCTTGTTCCAGGACTACACGGAAGTCACTCCCACACTACTCCGTACCATCCCCAAGGGTTCAACCGGACCTTCTTGCAGATGCTGAGAACACTAACAGACAGGGAAAAGAAGAAATTGAAGAACTTACCTCAAGTGGTGCATGCTTACAACTGCACACAGCACGAGTCCACAGGATACTCTCCCTTTTACCTGCTGTATGGCCGGCATCCTCACCTTCCAGTGGATCTGATCTTCGGCCTGGTGGAGCAAGTGGAAGAAACAACACCAAAAGGGTACGTGGAGCATTGGGCAAACAGAATGACTGAAGCATACAAGATCACGGAAAGCCACAGTCGCCAGGCAAGCGCGAGAGGGAAAGCACAGTACAATCGAAAAGTGAGAGGAGTGGTGCTGAAGGTAGGGGATCGAGTACCTGTCAGGAACCTCGGGGAGCGAGGAGGCCCAGGAAAACAAAAAGACAGAAAAGGACAAAAAGTCAGTGAACTGACAGACTCGGATGCGGAAAGTAGTGTCAGAGGATACTGGTTGAAAGCTCCAGTCAGCTTGCCAACAGCGGGGAACAACCTACTCCCAGAGCGAGCACCTGTAAGAGAAAGCACTCGCTTAAGAGCTACAGATACTTACCTTGAGACAGCATGTCTGGACAACACCGATAAAGAAAATGGTGTGAATCCAGAAAGTGGGTCCGAGGACTTAGAAAGAGCTCGGATTTTGAGGATAGAAGAACAGACCAGTGTGAGAAGGTCAGCCAGGGAGCGGAGGCCAAGACAGATTTATACGTATGAAATGTTGGGACAACCTGCAATCTACCCCTACCTCACAATGAACTCAGTTACTGCCTACCCTATCCCACACATGCCTGTTTGGGGTTTACCCAATTACACCATGCCTATCACTTACCCTCACTTATACTTACCTCCAGTACACACACCTTATGTGGTTACAACTGCTGTTTATTAAGAGTGGTTAAAGTGTTTGGTTATGGCAAGTTACATTTCCTTTTGTCAGGGAGATATGTACACAAATATTATAGAGTGACTACAATATAATAACTATATTTCTTTTGCACCCCAAAAACAGATATTGAGGGAAGAACGCATACATACATGCAGAGAAGCTGGAACAGAACAAACTTGATCAAATATCATTACATCTGTTTAATTACAGTAGGCAAAAGTTTGGGGTCGGTAAGTTTTTTTAAATGTTTTTAAAGTCTTTTCTGCTCACCAAGGCTGCATTTATTTGATCAAAAATGCAGTAAAAACAGTAAAATATTATTACAATTTTAAAAAACTCTTTTTTTTTACGTGAATATATTTCAAAATGTAATTTGTTCCTGTGATCAAAACTGAATTTTCAGCATCATTACTCCAGTCTTCAGTGTCACATGATCCTCAGAAATCATTCTAATATTCTGATTTACTGATCAAGAAACATTTATTATTATCAATGTTGAAAACGGCTGGGCTCCTTCATATTTTTGTTGAAAAATCTTACTGACCTCAAACTTTTGAATGGTACATGAAAAAAAAAAAAAAAATACAGGCAACCAAAAGTCTTTAAAGTCCTTTAATCGTGTGCTTTATTTGATGTCA

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000075_00682733_00683937.mRNA False 1929 mRNA 0.42 2 682483 684572

Neighbor

gene id symbol gene type direction distance location
CI01000075_00656048_00662437 NAPG coding upstream 18732 656009 ~ 663751 (+)
CI01000075_00548373_00566336 ACSS2L coding upstream 116000 548373 ~ 566483 (+)
CI01000075_00500237_00500551 NA coding upstream 181811 499709 ~ 500672 (+)
CI01000075_00293769_00296813 NA coding upstream 385398 293769 ~ 297085 (+)
CI01000075_00257233_00263578 RAB8A coding upstream 418527 257233 ~ 263956 (+)
CI01000075_00800884_00806063 NA coding downstream 116208 800780 ~ 806474 (+)
CI01000075_00821649_00821906 NA coding downstream 137077 821498 ~ 825595 (+)
CI01000075_00864628_00867240 NA coding downstream 179457 864029 ~ 868077 (+)
CI01000075_00877796_00880322 NA coding downstream 193224 877796 ~ 880444 (+)
CI01000075_00917306_00921588 NA coding downstream 232734 917306 ~ 922416 (+)
G288870 NA non-coding upstream 82046 594128 ~ 600437 (+)
G288838 NA non-coding upstream 105295 574285 ~ 577188 (+)
G288793 NA non-coding upstream 202997 474588 ~ 479486 (+)
G288805 NA non-coding upstream 227497 453493 ~ 454986 (+)
G288762 NA non-coding upstream 236606 445544 ~ 445877 (+)
G288905 NA non-coding downstream 41999 726571 ~ 726815 (+)
G288918 NA non-coding downstream 104199 788771 ~ 826689 (+)
G288948 NA non-coding downstream 187826 872398 ~ 872855 (+)
G288956 NA non-coding downstream 229073 913645 ~ 913925 (+)
G288755 NA other upstream 374562 305108 ~ 316301 (+)
G288708 NA other upstream 445212 235398 ~ 237271 (+)
CI01000075_01364135_01365758 EEF2B, EEF2L2, EEF2.2, EF2, EEF2 other downstream 644214 1364122 ~ 1365843 (+)
CI01000075_01404076_01444348 UNC13A other downstream 699471 1404076 ~ 1444410 (+)
G289319 NA other downstream 915609 1600181 ~ 1605306 (+)

Expression


Co-expression Network