CI01000075_01506719_01516006


Basic Information

Item Value
gene id CI01000075_01506719_01516006
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000075
NCBI id null
chromosome length 1642109
location 1505543 ~ 1516053 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000075_01506719_01516006.mRNA
CTTTAAAACCAGCACAATTCCAGCACAAATACATACATACTGTACATATCTAGGCTAAAGGATACACCTTTCATCTGCAGCGCCCAGTCCTAGTTTGACACACATTTCCACCGTCTGCACGTGCTGATCCCGCGTCCTCACAGGCACCTGCTGTCCTGTCCCATATAATCATTATCTCCTGAAAAACTGGCACTTCGCAGCTTAGCGCTCTGATCTGTGTGACCTTTTCAAATGAGCAATCTGAGAAATTATACTTTCACCCAGGACAGCGCTGCTCTCATTTCTCCGAACGGCAGAAAAATCATTTCACGCGTCACTGGACTAATCCAGCCTCTCCAGTCATGTTCAACGACAGATCTGCCACCTTCAGCACACGGCCAATACAAATAACACCATCACCGGCCGTGTAACCATGCCGACGGGATGTGTATCTTCATTTGTACTCGTCACATGACAACATCAAGGACCTTGTTACTCAAAAAACTCACAAGCGTTACAGAGACGAACAGATGGAGCGAATCACTCAGCAGAAAAGGAGAGGAAACAAATACACCCTGAAGATGAAGCTGGAGCTGGAGTTCATAATCAGCTTATCTGATCCATGTTCTCTGATCTCAACAGCTGGAAGGGTCTCTCCTCGGCGTTTAGTTACGCATGAATGTAAAAGATCCACCGCATACCGAGATCTGCAGCATCCATCCCGTATCCCGCGCCGACCACCGCGTCCGCGTCCTCCGGCAGCGCGGAACATCCTCCGGCCGCAGCAGCTCCCTCCATCAGACCCGGATCAAACGCGCTCGATCACACGCTCGTGCTCATGTGAGTCCGATTCGCTCGAGCGCCGCTGCTGCTGCTACGCCAGCGATGACGTCACCGGGCCCGGGGCAGCTCCGATGCGACGTTTTTTCTAGTATCGCCTTTCAAAACGACGTCAGCCATGGAGGAATTTGCGTAAGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000075_01506719_01516006.mRNA False 958 mRNA 0.51 4 1506210 1516053

Neighbor

gene id symbol gene type direction distance location
CI01000075_01466937_01467865 NA coding upstream 38149 1466937 ~ 1468061 (+)
CI01000075_01451280_01460210 RAB11B.2.L, RB11B, RAB11B.1.S, RAB11B.2, RAB11B.1, RAB11B, RAB11BA, RAB11BB coding upstream 44574 1451280 ~ 1461636 (+)
CI01000075_01404076_01444348 UNC13A coding upstream 61800 1404076 ~ 1444410 (+)
CI01000075_01364135_01365758 EEF2B, EEF2L2, EEF2.2, EF2, EEF2 coding upstream 140367 1364122 ~ 1365843 (+)
CI01000075_01159479_01160597 KLF2B coding upstream 345547 1159479 ~ 1160663 (+)
CI01000075_01526289_01529484 POLR2E, POLR2EA, POLR2EB coding downstream 10188 1526241 ~ 1529656 (+)
CI01000075_01609077_01609286 NA coding downstream 93024 1609077 ~ 1610221 (+)
G289390 NA non-coding upstream 2307 1494413 ~ 1503903 (+)
G289340 NA non-coding upstream 39819 1465437 ~ 1466391 (+)
G289379 NA non-coding upstream 58953 1447045 ~ 1447257 (+)
G289378 NA non-coding upstream 60342 1445490 ~ 1445868 (+)
G289377 NA non-coding upstream 60900 1445106 ~ 1445310 (+)
G289397 NA non-coding downstream 271 1516324 ~ 1516605 (+)
G289329 NA non-coding downstream 2937 1518990 ~ 1524862 (+)
G289398 NA non-coding downstream 14300 1530353 ~ 1530598 (+)
G289401 NA non-coding downstream 27610 1543663 ~ 1545087 (+)
G289402 NA non-coding downstream 29430 1545483 ~ 1547588 (+)
CI01000075_00917306_00921588 NA other upstream 583794 917306 ~ 922416 (+)
G288755 NA other upstream 1198289 305108 ~ 316301 (+)
G288708 NA other upstream 1268939 235398 ~ 237271 (+)
G289319 NA other downstream 84128 1600181 ~ 1605306 (+)
G289367 NA non-coding upstream 122388 1369117 ~ 1369541 (+)

Expression


Co-expression Network