G288686


Basic Information

Item Value
gene id G288686
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000075
NCBI id null
chromosome length 1642109
location 57929 ~ 58240 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU327366
CGACTTTATTCAACAAATTTGTCTCTCCCATCATTCTCCTACGCTATTTACGTTCAGCGCTTCCAGGTTCTGACAGGGGAGAGATGAATTTGTTGAATAATGTCGTTATTTTTGTTTTGGTGCACAAAAAGTAGTATAAAGACATCGTTAAAATAGTCCACGACTACACTGGTTCAACCTTAATGTTATGAAATGACAAGAATACTTTTTGTGCGTAACCGTCACATCCTTTTGATTTTCGTGGCAAAAACGTCCCGAGTCCTTCACATAAAAATCAGTCTACACGCTTTTATAGACAACCTAGAAAGTCGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU327366 True 312 lncRNA 0.38 1 57929 58240

Neighbor

gene id symbol gene type direction distance location
CI01000075_00015676_00016381 UBA52, GM7808, UBA52.L coding upstream 41500 15676 ~ 16429 (+)
CI01000075_00001171_00013300 CERS4B coding upstream 44568 1171 ~ 13361 (+)
CI01000075_00093704_00094561 JUND coding downstream 34971 93211 ~ 94652 (+)
CI01000075_00110314_00117133 NA coding downstream 51788 110028 ~ 117267 (+)
CI01000075_00190821_00197570 CPLX4C coding downstream 132326 190566 ~ 197909 (+)
CI01000075_00216589_00224690 RX2 coding downstream 157889 216129 ~ 224858 (+)
CI01000075_00252158_00255198 NA coding downstream 193918 252158 ~ 255206 (+)
G288685 NA non-coding upstream 40 57467 ~ 57889 (+)
G288670 NA non-coding upstream 30134 25966 ~ 27795 (+)
G288669 NA non-coding upstream 32244 24342 ~ 25685 (+)
G288668 NA non-coding upstream 35514 20224 ~ 22415 (+)
G288647 NA non-coding downstream 142 58382 ~ 60789 (+)
G288649 NA non-coding downstream 4619 62859 ~ 63099 (+)
G288652 NA non-coding downstream 5485 63725 ~ 64024 (+)
G288655 NA non-coding downstream 6124 64364 ~ 64947 (+)
G288657 NA non-coding downstream 10155 68395 ~ 69408 (+)
G288708 NA other downstream 177158 235398 ~ 237271 (+)
G288755 NA other downstream 246868 305108 ~ 316301 (+)
CI01000075_00917306_00921588 NA other downstream 859261 917306 ~ 922416 (+)
CI01000075_01364135_01365758 EEF2B, EEF2L2, EEF2.2, EF2, EEF2 other downstream 1270546 1364122 ~ 1365843 (+)
CI01000075_01404076_01444348 UNC13A other downstream 1325803 1404076 ~ 1444410 (+)

Expression


Co-expression Network