G288701


Basic Information

Item Value
gene id G288701
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000075
NCBI id null
chromosome length 1642109
location 130701 ~ 130970 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU327387
ACGGGTCTGGGATCAGCCTCATTGTCCTGTCATGATTCAGGAACCTCCGATTCCCCTGCTGGACTCCAGGCGGAGCACACAAACATTGAGTCATTCTGTGATCCGTCTCTTCTCCCGTCTGGCCCCAGAAAGACAAATGGTGTACAGGTTAACCAGGGTGTGTTGCTCGTGACTAGCCGCTAAGTGACTGTGGGTTATCCGAGCGCACAAGGTCAAACACAGTCATTTTTCTTGGCCTGAGCCGCCGACTAAACGACGCAGATGATTCTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU327387 True 270 lncRNA 0.53 1 130701 130970

Neighbor

gene id symbol gene type direction distance location
CI01000075_00110314_00117133 NA coding upstream 13434 110028 ~ 117267 (+)
CI01000075_00093704_00094561 JUND coding upstream 36049 93211 ~ 94652 (+)
CI01000075_00015676_00016381 UBA52, GM7808, UBA52.L coding upstream 114272 15676 ~ 16429 (+)
CI01000075_00001171_00013300 CERS4B coding upstream 117340 1171 ~ 13361 (+)
CI01000075_00190821_00197570 CPLX4C coding downstream 59596 190566 ~ 197909 (+)
CI01000075_00216589_00224690 RX2 coding downstream 85159 216129 ~ 224858 (+)
CI01000075_00252158_00255198 NA coding downstream 121188 252158 ~ 255206 (+)
CI01000075_00257233_00263578 RAB8A coding downstream 126263 257233 ~ 263956 (+)
CI01000075_00293769_00296813 NA coding downstream 162799 293769 ~ 297085 (+)
G288699 NA non-coding upstream 22958 107426 ~ 107743 (+)
G288662 NA non-coding upstream 44287 84887 ~ 86414 (+)
G288657 NA non-coding upstream 61293 68395 ~ 69408 (+)
G288655 NA non-coding upstream 65754 64364 ~ 64947 (+)
G288652 NA non-coding upstream 66677 63725 ~ 64024 (+)
G288694 NA non-coding downstream 18480 149450 ~ 221855 (+)
G288693 NA non-coding downstream 21136 152106 ~ 155120 (+)
G288714 NA non-coding downstream 38899 169869 ~ 172976 (+)
G288735 NA non-coding downstream 107899 238869 ~ 239082 (+)
G288711 NA non-coding downstream 113932 244902 ~ 247066 (+)
G288708 NA other downstream 104428 235398 ~ 237271 (+)
G288755 NA other downstream 174138 305108 ~ 316301 (+)
CI01000075_00917306_00921588 NA other downstream 786531 917306 ~ 922416 (+)
CI01000075_01364135_01365758 EEF2B, EEF2L2, EEF2.2, EF2, EEF2 other downstream 1197816 1364122 ~ 1365843 (+)
CI01000075_01404076_01444348 UNC13A other downstream 1253073 1404076 ~ 1444410 (+)

Expression


Co-expression Network