G288755


Basic Information

Item Value
gene id G288755
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000075
NCBI id null
chromosome length 1642109
location 305108 ~ 316301 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU327460
AGGTAAAATATTTTCATTTATTTTTTTTATTTGGAATGCATTTAATTCACTTAACTACGAAAAGTGGCAACATTATGTCTGCTCAGTGAGTGATTGGCTTGGCAAGTAAGTTTTCATTTATATTTCATTTAGGCTACATTTATATTGTATGTGATTATTTATGTCCTTTATATTCTTCATTTTAACTTTATTTTTGTGTATTTAGTTCTCATGGTATCTTGAGTTGGATGGTTATCCTCATGGTGAACCAGTCAATAAATCGCCAATCATTCAGAGAAATTACTAGGGGGAGCTACACAGGCGTTCAAGGCATCCGAGGCATCCGAGGCATTTCAGGCATCCGAGGCATTTCAGGCATCCGAGGCATCCGAGGCATTTCAGGCATCCGGCTTTTCAGGCACTCGAGGCCTTTCAGCCACCCGAGGCCTTTCAGGCATCCGAGGCTTTTCAGGCACTCGAGGCCTTTCAGCCACCCGAGGCCTTTCAGGCACCCAAGGCCTTTCAGACACTTGAGGCCTTTCAGGCACCCGAGGCCTTTCAGGTATCCAATGCATTTGAGGCATTTCAGTCATTAGAGGGATTTCAGTCATTTCAGTTGTTCCTAGCATTCCAGTTGTTTGAGGAATTTCAGTCATTTGAGAGATTTCAGGGATTTCAGTCATTTGAGGGATTTTAGGCATTTGAGGAGTTTGAGACATTTCAGTCATTCCAGGCATTTCAGTCGTTCCAGGTATTTCAGTCGTTCCAGGCATTTCTGTTGTTGCAGGCATTTCAGACATTTCTGTGATTCGAGGCATTTCAGCCCTTTCAGTCAGTCGAGGCATTTCAGTTGTTTGAGGCATTTCAGTCATTTGAGGCATTTCAGTCACTCGAGGCATTTTAGGCATTTCAGACATTTCAGTTGTTCGAGGCAATTCTGTTTGAGTGATTTCAGGTATTTCAGGCATTTCAGACATTTGAGGAGTTTGAAGCATTTGAGTTGTTTGAGGCATTTCAGACATTTCAGGCATTCCAAGCATTTCAGGCATTTCAGACATTTGAGGAGTTAGAGGCATTTCAGTCGTTTGAGGCATTTTAGTTGTTCTAGGCATTTCAGGCATTTCAGTCTTTCGAGGCATTTCAGTCGTTTGAGGTATTTCAGTCGTTTGAGGCATTTTAAGCATTTCAGATATTTCAGTTGTTCGAGGCAATTCTGTTTGAGTGATTTCAGGTATTTCAGTCGTTTGAGGCATTTCGGACATTTTAGACATTCTAAGGATTTCAGTAGTTTGAGGCATTTTAGGCTTTTCAGTCATTCGAGGGATTTCAGGCATTTCAGTTGTTCGAGGTATTTCAGACATTTTAGGAGTTCGAGGCATTTCAGTCATTTGAGGGATTTCAGGCATTTCAGTTGTTCGAGAAATATCAGGCATTTCAGTCGTTCGAGGCATTTCATTAGTTTGAGGCATTTCAGGCCTTTCAGTCGTTCGAGGCATTTCATTAGTTTGAGGCATTTCAGGAATTTCTGTCGTTTGAGGGATTTCAGGCATTTCAATCATTCGAGGGATTTCGGGCGTTTTAGTTGTTTGAGACATTTGAGGAGTTTGAGGCATTTCAGTTGTTTGTGCCATTTCAGGCATTTCATTAGTTTGAGGCATTTCAGTCGTCTGAGGCATTTCAGACATTTCAGTAGTTCGAGGCATTTGAGGCATTTCGGCCGTTCGAGAGATTTTAGGCATTTCAGTTGTTCGAGGCATTTCAGACATTTCAGTAGTTCGAGGCATTTCAGTCATTTGAGGGATTTCAGGCATTTCAGTCGTTCGAAGGATTTCAGTCATTTCAGTCGTTCGAGGCATTTTAGTCGTTTGAGGCATTTCAGACATTTCAGATGTTCTAAGGATTTCCGTCGTTTCAGGCATTTCAGTTGTTTGAGGCATTTCATTAGTTTGAGGGATTTCAGACATTTCAGTCATTCGAGAGATTTCAGGCATTTCAGTCGCTCCAGGGATTTCAGGAGTTTGAGGCATTTCAGTTGTTTGAGGCATTTCAGGCATTTCAGTTGTTCGAGGGATTTCATTAGTTCGAGGCATTTCAGGTATTTTAGTCATTCGAGGGATTTCAGGCATTTCAGTCGTTCCAGACATTTCAGTCGTTCGAGGGATTTCAGTCATTTCACTTGTTACAGGCACTTCAGTTGTTCCAGGCATTTTAGGCATTTCAGTCATTTCAGGTATTTTAGGCATTGCCGACGTTCGAGGCATTTCAGGCATTGCAGTCGTTCGAGGCATTTCAGTCGTTCGAGGCATTTTAATTGTTCGAGGGATTTCAGTCATTTCAGTCGTTCCAGGCATTTCTGGTCTTTGAGGCATTGCAGTAGCTTGAGGCATTGGAGGCACTGGAGGCTCCGGAATTCTCAGAGGCACTAAAGGCCCTGGAGGCGGCGGAAACCACTTAGGCCATTCAAGACCTGACAGTCCCTCCACCCACTCCATGAGGGAACGGACCCATCTTTTCCTGGGATTAGCACAGAACTTATGGCCATTATCCAATATGAA
>TU327465
AGGTAAAATATTTTCATTTATTTTTTTTATTTGGAATGCATTTAATTCACTTAACTACGAAAAGTGGCAACATTATGTCTGCTCAGTGAGTGATTGGCTTGGCAAGTAAGTTTTCATTTATATTTCATTTAGGCTACATTTATATTGTATGTGATTATTTATGTCCTTTATATTCTTCATTTTAACTTTATTTTTGTGTATTTAGTTCTCATGGTATCTTGAGTTGGATGGTTATCCTCATGGTGAACCAGTCAATAAATCGCCAATCATTCAGAGAAATTACTAGGGGGAGCTACACAGGCGTTCAAGGCATCCGAGGCATCCGAGGCATTTCAGGCATCCGAGGCATTTCAGGCATCCGAGGCATCCGAGGCATTTCAGGCATCCGGCTTTTCAGGCACTCGAGGCCTTTCAGCCACCCGAGGCCTTTCAGGCATCCGAGGCTTTTCAGGCACTCGAGGCCTTTCAGCCACCCGAGGCCTTTCAGGCACCCAAGGCCTTTCAGACACTTGAGGCCTTTCAGGCACCCGAGGCCTTTCAGGTATCCAATGCATTTGAGGCATTTCAGTCATTAGAGGGATTTCAGTCATTTCAGTTGTTCCTAGCATTCCAGTTGTTTGAGGAATTTCAGTCATTTGAGAGATTTCAGGGATTTCAGTCATTTGAGGGATTTTAGGCATTTGAGGAGTTTGAGACATTTCAGTCATTCCAGGCATTTCAGTCGTTCCAGGTATTTCAGTCGTTCCAGGCATTTCTGTTGTTGCAGGCATTTCAGACATTTCTGTGATTCGAGGCATTTCAGCCCTTTCAGTCAGTCGAGGCATTTCAGTTGTTTGAGGCATTTCAGTCATTTGAGGCATTTCAGTCACTCGAGGCATTTTAGGCATTTCAGACATTTCAGTTGTTCGAGGCAATTCTGTTTGAGTGATTTCAGGTATTTCAGGCATTTCAGACATTTGAGGAGTTTGAAGCATTTGAGTTGTTTGAGGCATTTCAGACATTTCAGGCATTCCAAGCATTTCAGGCATTTCAGACATTTGAGGAGTTAGAGGCATTTCAGTCGTTTGAGGCATTTTAGTTGTTCTAGGCATTTCAGGCATTTCAGTCTTTCGAGGCATTTCAGTCGTTTGAGGTATTTCAGTCGTTTGAGGCATTTTAAGCATTTCAGATATTTCAGTTGTTCGAGGCAATTCTGTTTGAGTGATTTCAGGTATTTCAGTCGTTTGAGGCATTTCGGACATTTTAGACATTCTAAGGATTTCAGTAGTTTGAGGCATTTTAGGCTTTTCAGTCATTCGAGGGATTTCAGGCATTTCAGTTGTTCGAGGTATTTCAGACATTTTAGGAGTTCGAGGCATTTCAGTCATTTGAGGGATTTCAGGCATTTCAGTCGTTCGAGGCATTTCATTAGTTTGAGGCATTTCAGGCCTTTCAGTCGTTCGAGGCATTTCATTAGTTTGAGGCATTTCAGGAATTTCTGTCGTTTGAGGGATTTCAGGCATTTCAATCATTCGAGGGATTTCGGGCGTTTTAGTTGTTTGAGACATTTGAGGAGTTTGAGGCATTTCAGTTGTTTGTGCCATTTCAGGCATTTCATTAGTTTGAGGCATTTCAGTCGTCTGAGGCATTTCAGACATTTCAGTAGTTCGAGGCATTTGAGGCATTTCGGCCGTTCGAGAGATTTTAGGCATTTCAGTTGTTCGAGGCATTTCAGACATTTCAGTAGTTCGAGGCATTTCAGTCATTTGAGGGATTTCAGGCATTTCAGTCGTTCGAAGGATTTCAGTCATTTCAGTCGTTCGAGGCATTTTAGTCGTTTGAGGCATTTCAGACATTTCAGATGTTCTAAGGATTTCCGTCGTTTCAGGCATTTCAGTTGTTTGAGGCATTTCATTAGTTTGAGGGATTTCAGACATTTCAGTCATTCGAGAGATTTCAGGCATTTCAGTCGCTCCAGGGATTTCAGGAGTTTGAGGCATTTCAGTTGTTTGAGGCATTTCAGGCATTTCAGTTGTTCGAGGCATTTCATTAGTTTGAGGCATTTCAGGCATTTTAGTCGTTCCAGGCATTTCAGTCGTTCCAGGCATTTCAGTCGTTCCAGGCATTTCAGTTGTTCGTGGGATTTCATGCATTTCAGTCGTTCCAGGGATTTCAGGAGTTTGAGGCATTTCAGTTGTTCGTGGGATTTCACGCATTTCAGTCGTTCCAGGGATTTCATTAGTTCGAGGCATTTCAGGTATTTTAGTCATTCGAGGGATTTCAGGCATTTCAGTCGTTCCAGACATTTCAGTCGTTCGAGGGATTTCAGTCATTTCACTTGTTACAGGCACTTCAGTTGTTCCAGGCATTTTAGGCATTTCAGTCATTTCAGGTATTTTAGGCATTGCCGACGTTCGAGGCATTTCAGGCATTGCAGTCGTTCGAGGCATTTCAGTCGTTCGAGGCATTTTAATTGTTCGAGGGATTTCAGTCATTTCAGTCGTTCCAGGCATTTCTGGTCTTTGAGGCATTGCAGTAGCTTGAGGCATTGGAGGCACTGGAGGCTCCGGAATTCTCAGAGGCACTAAAGGCCCTGGAGGCGGCGGAAACCACTTAGGCCATTCAAGACCTGACAGTCCCTCCACCCACTCCATGAGGGAACGGACCCATCTTTTCCTGGGATTAGCACAGAACTTATGGCCATTATCCAATATGAA
>TU327469
AGGTAAAATATTTTCATTTATTTTTTTTATTTGGAATGCATTTAATTCACTTAACTACGAAAAGTGGCAACATTATGTCTGCTCAGTGAGTGATTGGCTTGGCAAGTAAGTTTTCATTTATATTTCATTTAGGCTACATTTATATTGTATGTGATTATTTATGTCCTTTATATTCTTCATTTTAACTTTATTTTTGTGTATTTAGTTCTCATGGTATCTTGAGTTGGATGGTTATCCTCATGGTGAACCAGTCAATAAATCGCCAATCATTCAGAGAAATTACTAGGGGGAGCTACACAGGCGTTCAAGGCATCCGAGGCATCCGAGGCATTTCAGGCATCCGAGGCATTTCAGGCATCCGAGGCATCCGAGGCATTTCAGGCATCCGGCTTTTCAGGCACTCGAGGCCTTTCAGCCACCCGAGGCCTTTCAGGCATCCGAGGCTTTTCAGGCACTCGAGGCCTTTCAGCCACCCGAGGCCTTTCAGGCACCCAAGGCCTTTCAGACACTTGAGGCCTTTCAGGCACCCGAGGCCTTTCAGGTATCCAATGCATTTGAGGCATTTCAGTCATTAGAGGGATTTCAGTCATTTCAGTTGTTCCTAGCATTCCAGTTGTTTGAGGAATTTCAGTCATTTGAGAGATTTCAGGGATTTCAGTCATTTGAGGGATTTTAGGCATTTGAGGAGTTTGAGACATTTCAGTCATTCCAGGCATTTCAGTCGTTCCAGGTATTTCAGTCGTTCCAGGCATTTCTGTTGTTGCAGGCATTTCAGACATTTCTGTGATTCGAGGCATTTCAGCCCTTTCAGTCAGTCGAGGCATTTCAGTTGTTTGAGGCATTTCAGTCATTTGAGGCATTTCAGTCACTCGAGGCATTTTAGGCATTTCAGACATTTCAGTTGTTCGAGGCAATTCTGTTTGAGTGATTTCAGGTATTTCAGGCATTTCAGACATTTGAGGAGTTTGAAGCATTTGAGTTGTTTGAGGCATTTCAGACATTTCAGGCATTCCAAGCATTTCAGGCATTTCAGACATTTGAGGAGTTAGAGGCATTTCAGTCGTTTGAGGCATTTTAGTTGTTCTAGGCATTTCAGGCATTTCAGTCTTTCGAGGCATTTCAGTCGTTTGAGGTATTTCAGTCGTTTGAGGCATTTTAAGCATTTCAGATATTTCAGTTGTTCGAGGCAATTCTGTTTGAGTGATTTCAGGTATTTCAGTCGTTTGAGGCATTTCGGACATTTTAGACATTCTAAGGATTTCAGTAGTTTGAGGCATTTTAGGCTTTTCAGTCATTCGAGGGATTTCAGGCATTTCAGTTGTTCGAGGTATTTCAGACATTTTAGGAGTTCGAGGCATTTCAGTCATTTGAGGGATTTCAGGCATTTCAGTCGTTCGAGGCATTTCATTAGTTTGAGGCATTTCAGGCCTTTCAGTCGTTCGAGGCATTTCATTAGTTTGAGGCATTTCAGGAATTTCTGTCGTTTGAGGGATTTCAGGCATTTCAATCATTCGAGGGATTTCGGGCGTTTTAGTTGTTTGAGACATTTGAGGAGTTTGAGGCATTTCAGTTGTTTGTGCCATTTCAGGCATTTCATTAGTTTGAGGCATTTCAGTCGTCTGAGGCATTTCAGACATTTCAGTAGTTCGAGGCATTTGAGGCATTTCGGCCGTTCGAGAGATTTTAGGCATTTCAGTTGTTCGAGGCATTTCAGACATTTCAGTAGTTCGAGGCATTTCAGTCATTTGAGGGATTTCAGGCATTTCAGTCGTTCGAAGGATTTCAGTCATTTCAGTCGTTCGAGGCATTTTAGTCGTTTGAGGCATTTCAGACATTTCAGATGTTCTAAGGATTTCCGTCGTTTCAGGCATTTCAGTTGTTTGAGGCATTTCATTAGTTTGAGGGATTTCAGACATTTCAGTCATTCGAGAGATTTCAGGCATTTCAGTCGCTCCAGGGATTTCAGGAGTTTGAGGCATTTCAGTTGTTTGAGGCATTTCAGGCATTTCAGTTGTTCGAGGGATTTCATTAGTTCGAGGCATTTCAGGTATTTTAGTCATTCGAGGGATTTCAGGCATTTCAGTCGTTCCAGACATTTCAGTCGTTCGAGGGATTTCAGTCGTTCCAGGGATTTCAGGAGTTTGAGGCATTTCAGTTGTTTGAGGCATTTCAAGCATTTCAGTTGTTCGAGGCATTTCATTAGTTCGAGGCATTTTAGGCATTTCAGTTGTTCGAGGGATTTCAGGCATTTCAGTCATTCAAGGCATTTCTGGCATTCCAGGGATTTCAGGCATCCCAGGCGTTTGAGGCATTTCAGTCATTTGAGTCATTTCAGTTGTTCCAGGCATTTATGTTGTTCAAGGCATTTCAGGCATTTCTGTCATTCGAGGGAATTCCGTCATTTCAGACTTTTGAGGCATTTCAGACATTTCAGGAGTTCGAAGGATTTCGGTAGTTTGAGGCATTTTAGGCATTTCAGTCGATCGAGACATTTCAGGCATTTCGGTAGTTTCAGGCATTTTAGACATTTCAGTCATTCTAGGCATTTCAGGCATTTCAGTTATGCGAGGCATTTCAGACCTTTCAGTTGTTCGAGGCTTTTCAGTCATTTGAGGCATTTCAGTTGTTTGAGGCATTTCAGTCGTTTGAGTTATTTGAGGCATTTCATTCGTTCCAGGCATTTTAGTCGTTTGAGGGATTTCAGGCATTTCAGTAGTTCGAGGCATTTTAGGCACTCCAGTTGATAAAGGCATTTCAGGTGTTCGAAGGATTTCAGGAATTCCAGTCGTTCGAGTCATTTTAGGCATTTCATTCATTCGAGGCATTTTAGTTGTTCGAGGCATTTTAGGCATTTCAGTCATTCGAGGCATTTCAGGCATATCAGTCGTTCNNNN
>TU327478
AGGTAAAATATTTTCATTTATTTTTTTTATTTGGAATGCATTTAATTCACTTAACTACGAAAAGTGGCAACATTATGTCTGCTCAGTGAGTGATTGGCTTGGCAAGTAAGTTTTCATTTATATTTCATTTAGGCTACATTTATATTGTATGTGATTATTTATGTCCTTTATATTCTTCATTTTAACTTTATTTTTGTGTATTTAGTTCTCATGGTATCTTGAGTTGGATGGTTATCCTCATGGTGAACCAGTCAATAAATCGCCAATCATTCAGAGAAATTACTAGGGGGAGCTACACAGGCGTTCAAGGCATCCGAGGCATCCGAGGCATTTCAGGCATCCGAGGCATTTCAGGCATCCGAGGCATCCGAGGCATTTCAGGCATCCGGCTTTTCAGGCACTCGAGGCCTTTCAGCCACCCGAGGCCTTTCAGGCATCCGAGGCTTTTCAGGCACTCGAGGCCTTTCAGCCACCCGAGGCCTTTCAGGCACCCAAGGCCTTTCAGACACTTGAGGCCTTTCAGGCACCCGAGGCCTTTCAGGTATCCAATGCATTTGAGGCATTTCAGTCATTAGAGGGATTTCAGTCATTTCAGTTGTTCCTAGCATTCCAGTTGTTTGAGGAATTTCAGTCATTTGAGAGATTTCAGGGATTTCAGTCATTTGAGGGATTTTAGGCATTTGAGGAGTTTGAGACATTTCAGTCATTCCAGGCATTTCAGTCGTTCCAGGGATTTCAGTCATTTCACTTGTTACAGGCACTTCAGTTGTTCCAGGCATTTTAGGCATTTCAGTCATTTCAGGTATTTTAGGCATTGCCGACGTTCGAGGCATTTCAGGCATTGCAGTCGTTCGAGGCATTTCAGTCGTTCGAGGCATTTTAATTGTTCGAGGGATTTCAGTCATTTCAGTCGTTCCAGGCATTTCTGGTCTTTGAGGCATTGCAGTAGCTTGAGGCATTGGAGGCACTGGAGGCTCCGGAATTCTCAGAGGCACTAAAGGCCCTGGAGGCGGCGGAAACCACTTAGGCCATTCAAGACCTGACAGTCCCTCCACCCACTCCATGAGGGAACGGACCCATCTTTTCCTGGGATTAGCACAGAACTTATGGCCATTATCCAATATGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU327460 False 2534 lncRNA 0.43 3 305108 307921
TU327465 False 2696 TUCP 0.43 3 305108 307921
TU327469 False 2894 lncRNA 0.42 5 305108 316301
TU327478 True 1127 lncRNA 0.45 3 305108 307921

Neighbor

gene id symbol gene type direction distance location
CI01000075_00293769_00296813 NA coding upstream 8023 293769 ~ 297085 (+)
CI01000075_00257233_00263578 RAB8A coding upstream 41152 257233 ~ 263956 (+)
CI01000075_00252158_00255198 NA coding upstream 49902 252158 ~ 255206 (+)
CI01000075_00216589_00224690 RX2 coding upstream 80250 216129 ~ 224858 (+)
CI01000075_00190821_00197570 CPLX4C coding upstream 107199 190566 ~ 197909 (+)
CI01000075_00500237_00500551 NA coding downstream 183408 499709 ~ 500672 (+)
CI01000075_00548373_00566336 ACSS2L coding downstream 232072 548373 ~ 566483 (+)
CI01000075_00656048_00662437 NAPG coding downstream 339708 656009 ~ 663751 (+)
CI01000075_00682733_00683937 NA coding downstream 366182 682483 ~ 685507 (+)
CI01000075_00800884_00806063 NA coding downstream 484479 800780 ~ 806474 (+)
G288754 NA non-coding upstream 862 303978 ~ 304246 (+)
G288711 NA non-coding upstream 58042 244902 ~ 247066 (+)
G288735 NA non-coding upstream 66026 238869 ~ 239082 (+)
G288694 NA non-coding upstream 83253 149450 ~ 221855 (+)
G288773 NA non-coding downstream 8044 324345 ~ 328337 (+)
G288757 NA non-coding downstream 14203 330504 ~ 336468 (+)
G288781 NA non-coding downstream 50754 367055 ~ 367296 (+)
G288784 NA non-coding downstream 57109 373410 ~ 373685 (+)
G288764 NA non-coding downstream 58174 374475 ~ 375671 (+)
G288708 NA other upstream 67837 235398 ~ 237271 (+)
CI01000075_00917306_00921588 NA other downstream 601200 917306 ~ 922416 (+)
CI01000075_01364135_01365758 EEF2B, EEF2L2, EEF2.2, EF2, EEF2 other downstream 1012485 1364122 ~ 1365843 (+)
CI01000075_01404076_01444348 UNC13A other downstream 1067742 1404076 ~ 1444410 (+)
G289319 NA other downstream 1283880 1600181 ~ 1605306 (+)
G288714 NA non-coding upstream 132132 169869 ~ 172976 (+)

Expression


Co-expression Network