Gene
RNA
| Item | Value |
|---|---|
| gene id | XLOC_010705 |
| gene name | prss1 |
| gene type | coding |
| species | zebrafish (Danio rerio) |
| category of species | model fish |
| Item | Value |
|---|---|
| chromosome id | NC_007127.7 |
| NCBI id | CM002900.2 |
| chromosome length | 55266484 |
| location | 25080764 ~ 25085327 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| symbol | description |
|---|---|
| prss1 | Predicted to enable serine-type endopeptidase activity. Predicted to be involved in proteolysis. Predicted to be active in extracellular space. Is expressed in acinar cell; brain; digestive system; exocrine cell; and heart. Human ortholog(s) of this gene implicated in pancreatitis. Orthologous to several human genes including PRSS1 (serine protease 1). |
| id | name | namespace |
|---|---|---|
| GO:0006508 | proteolysis | biological_process |
| GO:0005615 | extracellular space | cellular_component |
| GO:0004252 | serine-type endopeptidase activity | molecular_function |
| GO:0016787 | hydrolase activity | molecular_function |
| GO:0008233 | peptidase activity | molecular_function |
| GO:0008236 | serine-type peptidase activity | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-010131-7 | Predicted to enable serine-type endopeptidase activity. Predicted to be involved in proteolysis. Predicted to be active in extracellular space. Is expressed in acinar cell; brain; digestive system; exocrine cell; and heart. Human ortholog(s) of this gene implicated in pancreatitis. Orthologous to several human genes including PRSS1 (serine protease 1). |
| ensembl_id | ENSDARG00000042993 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TCONS_00020951 | True | 871 | mRNA | 0.52 | 5 | 25080764 | 25085327 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| XLOC_010704 | NA | coding | downstream | 7872 | 25068504 ~ 25072892 (-) |
| XLOC_010703 | BX539313.3 | coding | downstream | 68366 | 24999679 ~ 25012398 (-) |
| XLOC_010702 | has1 | coding | downstream | 135427 | 24940377 ~ 24945337 (-) |
| XLOC_010701 | kcnn4 | coding | downstream | 248726 | 24743871 ~ 24832038 (-) |
| XLOC_010700 | BX005256.1 | coding | downstream | 372177 | 24705852 ~ 24708587 (-) |
| XLOC_010706 | BX571853.3 | coding | upstream | 89301 | 25174628 ~ 25206048 (-) |
| XLOC_010707 | LRATD2 | coding | upstream | 146636 | 25231963 ~ 25233515 (-) |
| XLOC_010708 | NA | coding | upstream | 152923 | 25238250 ~ 25241068 (-) |
| XLOC_010709 | prelid3a | coding | upstream | 190440 | 25275767 ~ 25285582 (-) |
| XLOC_010710 | BX571853.2 | coding | upstream | 243204 | 25328531 ~ 25328647 (-) |
| XLOC_010626 | CR392024.2 | misc | downstream | 4185589 | 20895112 ~ 20895175 (-) |
| XLOC_010690 | CR854851.1 | non-coding | downstream | 686301 | 24394346 ~ 24394463 (-) |
| XLOC_010686 | NA | non-coding | downstream | 1085435 | 23984776 ~ 23995329 (-) |
| XLOC_010683 | NA | non-coding | downstream | 1361191 | 23716831 ~ 23719573 (-) |
| XLOC_010711 | BX571853.1 | non-coding | upstream | 254609 | 25339936 ~ 25342126 (-) |
| XLOC_010732 | NA | non-coding | upstream | 1286370 | 26371697 ~ 26379456 (-) |
| XLOC_010734 | CR391910.2 | non-coding | upstream | 1417766 | 26503093 ~ 26507404 (-) |
| species | gene id | symbol | gene type | chromosome | NCBI id | location |
|---|---|---|---|---|---|---|
| grasscarp (Ctenopharyngodon idella) | CI01000027_05679544_05681461 | TRY, TRP-III | coding | CI01000027 | null | 5679479 ~ 5681477 (-) |
| bowfin (Amia calva) | AMCG00015143 | LOC108431067 | coding | CM030132.1 | CM030132.1 | 2988655 ~ 3000677 (+) |
