Gene
RNA
| Item | Value |
|---|---|
| gene id | CI01000080_00328119_00328700 |
| gene name | NA |
| gene type | misc |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000080 |
| NCBI id | null |
| chromosome length | 5175454 |
| location | 328119 ~ 328700 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| CI01000080_00328119_00328700.mRNA | False | 179 | mRNA | 0.46 | 2 | 328119 | 328700 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000080_00318151_00318865 | NA | coding | downstream | 9254 | 317884 ~ 318865 (-) |
| CI01000080_00309567_00317169 | CARD9 | coding | downstream | 10450 | 308046 ~ 317669 (-) |
| CI01000080_00292016_00307681 | CCDC180 | coding | downstream | 20438 | 290561 ~ 307681 (-) |
| CI01000080_00202124_00211154 | HMGCR, HMGCRA | coding | downstream | 116965 | 201941 ~ 211154 (-) |
| CI01000080_00118423_00142677 | TTC37 | coding | downstream | 185442 | 118423 ~ 142677 (-) |
| CI01000080_00330537_00333221 | NA | coding | upstream | 1542 | 330242 ~ 333221 (-) |
| CI01000080_00521848_00524367 | OTP, OTPA, OTPB | coding | upstream | 192381 | 521081 ~ 524390 (-) |
| CI01000080_00597523_00605227 | LHFPL2B | coding | upstream | 268615 | 597315 ~ 606452 (-) |
| CI01000080_00614889_00638900 | HOMER1, HOMER1B | coding | upstream | 285162 | 613862 ~ 640684 (-) |
| CI01000080_00670914_00678760 | MTX3 | coding | upstream | 342049 | 670749 ~ 678760 (-) |
| G290258 | NA | non-coding | downstream | 62671 | 264677 ~ 265448 (-) |
| G290252 | NA | non-coding | downstream | 76186 | 251668 ~ 251933 (-) |
| G290203 | NA | non-coding | downstream | 128500 | 198709 ~ 199619 (-) |
| G290205 | NA | non-coding | downstream | 162645 | 164571 ~ 165474 (-) |
| G290360 | NA | non-coding | upstream | 171689 | 500389 ~ 501638 (-) |
| G290361 | NA | non-coding | upstream | 173104 | 501804 ~ 502067 (-) |
| G290362 | NA | non-coding | upstream | 173626 | 502326 ~ 503408 (-) |
| G290528 | NA | non-coding | upstream | 239853 | 568553 ~ 568756 (-) |
| G290529 | NA | non-coding | upstream | 252759 | 581459 ~ 581692 (-) |
| G290197 | NA | other | downstream | 48272 | 272397 ~ 279847 (-) |
| G290314 | NA | other | upstream | 79185 | 407885 ~ 408144 (-) |
| G292089 | NA | other | upstream | 1307062 | 1635762 ~ 1693395 (-) |
| G292349 | NA | other | upstream | 2189378 | 2518078 ~ 2525409 (-) |
| G292387 | NA | other | upstream | 2404887 | 2733587 ~ 2743246 (-) |
| CI01000080_03207204_03212602 | NA | other | upstream | 2880285 | 3207204 ~ 3212913 (-) |
