XLOC_010713 (adnp2a)


Basic Information

Item Value
gene id XLOC_010713
gene name adnp2a
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 25371653 ~ 25380969 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00020960
ACTTCTCTCCCATTGGTGGAAGTGCACTGTGCAGTATGTAAATCAGAAAACGTCACTTCCCGTCTTCCTGTACGCCATGTTTTTTCAGCAGGAGTGGGCTGATGTTTCAGTGAGATTTCATCAAAAGTGGGCAATCCTGCGCTCGGTTCGTATTTCAGCAGACCATCGTCAGTCCATCGGGAAAGGCGGGTCGAGCGCTACCTGGACGCTCCGGACGATGAAGTAGACGCTTCAGGAGCGCGCGCCTTACTAGTGACGCCGGAAGAAAACGGACGCGCGCAGACATTTATCCACTCATCTGTGCCAGAACACTGAAGGTAGACACTGATTCAGGATACGCCTCATAATCATTCACACCCTTCAGTTTATCAATGACATGTCCTGGCGTCTCTTTAAGTTACAAACAACTTTAAAGACACGAGTTGTTTTAATAACAGTAGTGGTTTCTGATCTGAAATTTGGCTTGCTAGGTACATAGTTACAACTAGCTGTGTTTATTATAACTATGTTATAGCTAGGCCTCAGTTTATTTCAGAAGTCGCTTTAATCTGTTCACTCGCATTTGAGGCTGAATTTGTGGTTTTGTGTTTATTCATATGACGGAAACAAACACTtcgttttatatttaattttgattaCAGGTTGAGCAAAATGTATCAGATTCCAGTGAAGAACCTTACAAAACTCAGACGACCGAGGAAACGGGTCAAAAGTATTTTGTGTGACATCGGGATGCAGCAGTGCCAGGATATGCTGGAGACATATAAATGTTTTGATGCTGGGGATGCAAGCTTTGACAACACAGAATGGGATGATTTCACTGACGGTCATGttggcaaaaagaaaaaaaagTATCCATACCGAAGCCAAAGTCTGTGCTGCAGTCTGTGTTGGTACTCCAGCCGGTCGGTGCCCACATTCAGAAGCCACATCCATCGCTGTCACTGGAAAAATCTGGATGGGGCCTGTTTGTTAATGTGCCCCTACTGCCCATTTGTCAGCTCTCCAAAAGTCACAGAACAacacattcagtttttccacatgCTGCCATCAAGAGCCCATCAGAGCCACCCTAGCCACACTTTGGCCCACACACCGAAAACCATATCAGTTACAGTTTCTGCTGATGCCGCTGACGACAGATACACTTGCGCGACCTGTGGTTATCATGACTCTTTATTGTATGTGATGAAGAAGCACGTCCTGGTAAACCACTTTGCTACGTTGCTGGATCGCTACTTTGGCCTTGGGTCGGAAAGTGCACCAATGGCTGGTCCGCAGATACGTGATGGCACACCTGTCAAATATCACTGCAAACTGTGCAAACTTCCAGCAGAGACCATTGAACATTTACTGTACCATATCTTGAGTTCAGAGAAGCACAAGGAACTACACTGGCAGATAATGCCTTGTATAATTGAAAAAGAATGCATGAACCAAATGGTTGGGCTACAGAATCTGCTGAACCTTGCACCTAAATCGATGCAGCCGGTCACGCTGTTTGCAAGACCGAACTATATTCCACAACAGACTCAACAAACTAATGGAAATGGCACAGTTCTTCTGGCCGGCCCAAGCAACGCGGCTGCTCTGTTTTGCTCTCCTGGTGCAGGCCAGATGTTTCTGTCTCCACAAACTCAAGCTCTGCTTTCAGGCACGACTGTGGCTGCGCTTCAGAATGCTCCGCATCCACAGTCCCCTGGCGGGATGTCCCAAGTTCTGCCTACCTCTCCAGTAGTCAAACCCCTCAATATGGTAATGCCAAACATGCCGCAGAACACACCCAAGACGTTACCCCTCACTATGACTGTGCCCAGGCTACCACCGCCCCAGCAAGGACCGCAGGTTCTTCTTCCTCCTGGCGTCCAGGTCAACCTCCCTGGCGAAATGGGTGTACGTTCACCATTTCTTGTTACTCAAGGTCTTCAGCTGAACCAGTCGGTTCCAAGAGCTCCCCTCATCACCTCGCAGTCTGTGCGTCTCATTCCCACAGGCAACAAAGTCAACGGTGTCCCGACCTACACTCTAGCACCCGTTCAAGTGACTGTTCCCGTCCATGGCGGACCCCCTCAAATGGTATTAGCGCAAAACCAGATTAGCCAGCCTCCAAATTCAGCAGTGGTAACCCCAGGGCTTATGCCTCCAGTTCAGAGGGCGATGAATAAAAATTCCAGACCAAATGAACTTGCTGTGCAGGCGCCGTTTTTGAAAAAACATGATAATCAAACTGTCAAGTGCCTGAGGTGCAAGATTTTACTGACAGAGCAGGGTATTTTCCAGCATTTGTTGCACGGCTTGAAGTGTCTGTTCTGCCCTCAGATGTTCTACTCCTTCAAGCAGATAATGGAGCACAGCAAGAAAGAGCACAGTCTGAAAGTCAAAGACAACCGACTTTACATAAAGGAACAGTTTAGTCTTGACTGTGATGATGAGGGCAACCTCATATTCAGCACTTTTAATCTGAACACGGATGTGCCTAAAGATCTGCTTGACAACCGAGAGCTTAACCTTGCACTGGTCACCAGCACTAAAGACAAGATTTACATAAAAATGTATCCAGATAAGGCAGAATACACAACTATGTTGAAGTCGGCACCAAACGCCTGTCCGTTTTGTCAAGTAAAGCTCCAGAACCCTGAAGACTACGAGCTGCATCTTCAAACGAAACACCATATCGTTCCCACCATCCATGCAATACTAAAAACACCTGCatacaaatgtatatattgttttgGGGTGTATACTGAAAAATCAACACCTAAAACCATCTCCATTCACGTGCAACGGTGTCGTTGTGCTCCTAAAGCCATCAAGGAAGCAGAGAGGAAACTGAATCCTGATACATCTGAATCTCACGACGGTGATGTATGCAGCTCTGTTCAGATGCCTGCTTCAGAAGTGACCTTCCAGGGGGCACCTGAATTTCCCAAGCCAAAGAAAGAAGCTGTCACGCCGAGGAACAGAAGAAGGAACACAAAGGCTTCCAAGACAGGAACTCCAGTCCCCGAAACCCCAGTTACACTGGTCTTGGAACCAATGGGAATGGAGAGGACGTCGTTTGAGGACAGAAAAGACTTCCTTTCACAGTACTTCCACAGAAAGCCATACGTGACAAAGACAGAAATCGAACTGCTCGCTTCCCGTTTGTGGATAAACAAGGCGGACGTGAAGGCGCACTTCAACAGCAAGCTCACTAAGTGCTTGAAAGCGATTCAGAAAAAGAGGGTTTGCGTACGTCTCGGGTTCAAAATGATTGAAGTGAACAAACTCAAGCACAATCTCTTCATTCCTGAGGTAAAGCCTGTTAAAAGAAAAGACCAAAACGAGGTAAACCTCAGCAGCCTTGTTCCAGGGGTGACTGTTAAAACAGAACAAGTGGATGCAACGACACAACATCCCCTCTTCATCCCGGAGGTACCAGTAACTATTAAAAAAGAGGAGGAAGTGTGTGAAATTGATCATAGCTTCATCATCCAAGAGGTGACTGTTAAACAAGAAGAAGTGGATGAAATGGAAGATGCGCTCTGTACAAATGGCTAATGGTGTTTTTAGATTAATTATGTTTGTATGCAGCATGTTgcgaaatgtttatttaaaaatacttgaTTCACACTTATAAGGTGGTTTGCCTCTGGGCATTGGAGTATGTAAAAAGAGGAACCTACAGCAAAGACTTTACAGTTTTGTAATTTCGTTGTATATAGTTCATATGATGATGacattaaaagttttttattatatatctcTATTGCAAGGAAAAAAACAACACTCGGGTTTCCTATCTTTTATAGTCATCCTTGTTTAAAACACCTGTAATTTAAATTTGAGGACATCAGTAGTGATAAAGTACTGCATTTAACATTTTATGAGTACTGTACAGAGAATGAAGACTTGGTTAACTAACTATTATTACTAACTTGCGGATTATGCAGCATTTCATAGCTGTATCACTGTGTCCCTGTAAAAGGGACActttgttgttttcatgttaatTTTCCCCCTATGTAATATACACTGTATTAATTTCAGACATGTGGAAAAAAAACAAGTGCCTCCGTCTTATTTAAAGTTTGCAGTTGTATTTGGCTGTTGGAATAAACGTGACTAAATATTACAGATGTGTGGTTTACTAGAGATAAAACTGGTTGTGTTTTGATATGCCTGCGGTAGGTATATAACGATGTTGAacaggaagatattttgatgggCACTTCAGAATACAGTGAATGTTATTTCAACCTTTAAGCATATTCAGACGATTCATCACAGCaccaaaaaaaagatttaaaggttGAATTTTTTATCTAATTTTCTATTTCTGTTTTATAGCAGaaaaatgatatacagttgaagtcagaattattagcaccccttgaatttatttattttttatttcccaaatgatgtttaacagagcgaggacattttcacagtatgtctgataatatattttttttatttcagctagaataaaagcattttttaaaaccattttagggtcaaaattgttagaccttttaagctatatattttgtcgatagtctacagaaaaaaaaaacatggttgtaCAATAACTTGATTAATTACCCTACTCCgcctaattaaattaatgaacctagttaagcctatgtcactttaagctgtatagacgtgtcttgaaaaatatctagtccaatattatttactgtcatcatagcaaagagaaaagaaatcagttattagcaatgagttattaaagctattatgtttagaaatgtgttaggaAAAATATTTTTCTCCGTCAAAcataaattgaggaaaaaataaagagggggaaaataattctgacttaaactgtatatattgaAGTCAAAGGCTACCAGATTACGACATCCTTTAAAATGTACTCTTGAATTTaacactcaaacaggtttaaaacaagtggaatggaattcggacggggcaaagcagtggcgcagtagatagtgctgtcgcctcacagcaagagggttgctgggtcggtggtttgagcctcggctcagttggtgtttctgtgtggagtttgcatgttctccctgcgttcgcgtgggtttcctccgggtgctccggtttcccccacagtccaaagacatgtggtacaggtgaattgggtaggctaaattgtccgtagtgtatgagtgtgtgtgtgtgtggatgtttcccagagaagggcatccgcttcgtaaacttgctggataagttggcggttcattccgctgtggtgaccccggattaataaagggactaagccgacaagaaaatgaatgaatagaattcggacgtactacatccaacattttgtcatggtcacttAACccacctgcgtcagttgcgtcgcttcactcccattcatgaatttgctcgcagggcatcatgggatagcgcagcgtgcatgggatgcgcactttagaatctcgccagaagtagtaagtcatccgggtacttctcaaaTACTGATTtccgaattctatgaattcggacatactacttggcttaCATACTGATTTTAATGTagtgtatagtatggaagtataaggtttcggacgcagccttaaaTTTTTTATCGGAAATAGCAAACCATCCAGGAACctctggcatactcttttcaacatactatggtttgggacatactaattctattttcaaacactatttaggatggatagtatgcagATTGGGACGCAGCAAGAGTGATAAAGCCAGATATGAaatagggatggttaggaggccatgatggacagagtcAAGTGGTTAAATTTTGttcaggatgccagggttaaacccctactctttttcaaaggacatccttgggtttttttttaatgaccacagagagtcaggacattGGTTTAACGCCTCATATAATGCCTGTttagacggcgctcactgagcagtatagagttcccATCAAtaaactggggcattaggacccacacagaccgcaggttgagcaacccctgctggtctcactaacaccacttccagcagcaacctagccttcacatgtggtctcccatccaggtactgaccaggcacagccctgcatAGCTTTAGTggacgaccatgtgagagttgcgaAGAGGTAGCTGCCAGCATAGAAATAGAAAATGTACTGTTTTTACAAGGACGTAAATGCTAAATCAAACAACCACTGCAG
>TCONS_00020961
CCTGTACGCCATGTTTTTTCAGCAGGAGTGGGCTGATGTTTCAGTGAGATTTCATCAAAAGTGGGCAATCCTGCGCTCGGTTCGTATTTCAGCAGACCATCGTCAGTCCATCGGGAAAGGCGGGTCGAGCGCTACCTGGACGCTCCGGACGATGAAGTAGACGCTTCAGGAGCGCGCGCCTTACTAGTGACGCCGGAAGAAAACGGACGCGCGCAGACATTTATCCACTCATCTGTGCCAGAACACTGAAGGTTGAGCAAAATGTATCAGATTCCAGTGAAGAACCTTACAAAACTCAGACGACCGAGGAAACGGGTCAAAAGTATTTTGTGTGACATCGGGATGCAGCAGTGCCAGGATATGCTGGAGACATATAAATGTTTTGATGCTGGGGATGCAAGCTTTGACAACACAGAATGGGATGATTTCACTGACGGTCATGttggcaaaaagaaaaaaaagTATCCATACCGAAGCCAAAGTCTGTGCTGCAGTCTGTGTTGGTACTCCAGCCGGTCGGTGCCCACATTCAGAAGCCACATCCATCGCTGTCACTGGAAAAATCTGGATGGGGCCTGTTTGTTAATGTGCCCCTACTGCCCATTTGTCAGCTCTCCAAAAGTCACAGAACAacacattcagtttttccacatgCTGCCATCAAGAGCCCATCAGAGCCACCCTAGCCACACTTTGGCCCACACACCGAAAACCATATCAGTTACAGTTTCTGCTGATGCCGCTGACGACAGATACACTTGCGCGACCTGTGGTTATCATGACTCTTTATTGTATGTGATGAAGAAGCACGTCCTGGTAAACCACTTTGCTACGTTGCTGGATCGCTACTTTGGCCTTGGGTCGGAAAGTGCACCAATGGCTGGTCCGCAGATACGTGATGGCACACCTGTCAAATATCACTGCAAACTGTGCAAACTTCCAGCAGAGACCATTGAACATTTACTGTACCATATCTTGAGTTCAGAGAAGCACAAGGAACTACACTGGCAGATAATGCCTTGTATAATTGAAAAAGAATGCATGAACCAAATGGTTGGGCTACAGAATCTGCTGAACCTTGCACCTAAATCGATGCAGCCGGTCACGCTGTTTGCAAGACCGAACTATATTCCACAACAGACTCAACAAACTAATGGAAATGGCACAGTTCTTCTGGCCGGCCCAAGCAACGCGGCTGCTCTGTTTTGCTCTCCTGGTGCAGGCCAGATGTTTCTGTCTCCACAAACTCAAGCTCTGCTTTCAGGCACGACTGTGGCTGCGCTTCAGAATGCTCCGCATCCACAGTCCCCTGGCGGGATGTCCCAAGTTCTGCCTACCTCTCCAGTAGTCAAACCCCTCAATATGGTAATGCCAAACATGCCGCAGAACACACCCAAGACGTTACCCCTCACTATGACTGTGCCCAGGCTACCACCGCCCCAGCAAGGACCGCAGGTTCTTCTTCCTCCTGGCGTCCAGGTCAACCTCCCTGGCGAAATGGGTGTACGTTCACCATTTCTTGTTACTCAAGGTCTTCAGCTGAACCAGTCGGTTCCAAGAGCTCCCCTCATCACCTCGCAGTCTGTGCGTCTCATTCCCACAGGCAACAAAGTCAACGGTGTCCCGACCTACACTCTAGCACCCGTTCAAGTGACTGTTCCCGTCCATGGCGGACCCCCTCAAATGGTATTAGCGCAAAACCAGATTAGCCAGCCTCCAAATTCAGCAGTGGTAACCCCAGGGCTTATGCCTCCAGTTCAGAGGGCGATGAATAAAAATTCCAGACCAAATGAACTTGCTGTGCAGGCGCCGTTTTTGAAAAAACATGATAATCAAACTGTCAAGTGCCTGAGGTGCAAGATTTTACTGACAGAGCAGGGTATTTTCCAGCATTTGTTGCACGGCTTGAAGTGTCTGTTCTGCCCTCAGATGTTCTACTCCTTCAAGCAGATAATGGAGCACAGCAAGAAAGAGCACAGTCTGAAAGTCAAAGACAACCGACTTTACATAAAGGAACAGTTTAGTCTTGACTGTGATGATGAGGGCAACCTCATATTCAGCACTTTTAATCTGAACACGGATGTGCCTAAAGATCTGCTTGACAACCGAGAGCTTAACCTTGCACTGGTCACCAGCACTAAAGACAAGATTTACATAAAAATGTATCCAGATAAGGCAGAATACACAACTATGTTGAAGTCGGCACCAAACGCCTGTCCGTTTTGTCAAGTAAAGCTCCAGAACCCTGAAGACTACGAGCTGCATCTTCAAACGAAACACCATATCGTTCCCACCATCCATGCAATACTAAAAACACCTGCatacaaatgtatatattgttttgGGGTGTATACTGAAAAATCAACACCTAAAACCATCTCCATTCACGTGCAACGGTGTCGTTGTGCTCCTAAAGCCATCAAGGAAGCAGAGAGGAAACTGAATCCTGATACATCTGAATCTCACGACGGTGATGTATGCAGCTCTGTTCAGATGCCTGCTTCAGAAGTGACCTTCCAGGGGGCACCTGAATTTCCCAAGCCAAAGAAAGAAGCTGTCACGCCGAGGAACAGAAGAAGGAACACAAAGGCTTCCAAGACAGGAACTCCAGTCCCCGAAACCCCAGTTACACTGGTCTTGGAACCAATGGGAATGGAGAGGACGTCGTTTGAGGACAGAAAAGACTTCCTTTCACAGTACTTCCACAGAAAGCCATACGTGACAAAGACAGAAATCGAACTGCTCGCTTCCCGTTTGTGGATAAACAAGGCGGACGTGAAGGCGCACTTCAACAGCAAGCTCACTAAGTGCTTGAAAGCGATTCAGAAAAAGAGGGTTTGCGTACGTCTCGGGTTCAAAATGATTGAAGTGAACAAACTCAAGCACAATCTCTTCATTCCTGAGGTAAAGCCTGTTAAAAGAAAAGACCAAAACGAGGTAAACCTCAGCAGCCTTGTTCCAGGGGTGACTGTTAAAACAGAACAAGTGGATGCAACGACACAACATCCCCTCTTCATCCCGGAGGTACCAGTAACTATTAAAAAAGAGGAGGAAGTGTGTGAAATTGATCATAGCTTCATCATCCAAGAGGTGACTGTTAAACAAGAAGAAGTGGATGAAATGGAAGATGCGCTCTGTACAAATGGCTAATGGTGTTTTTAGATTAATTATGTTTGTATGCAGCATGTTgcgaaatgtttatttaaaaatacttgaTTCACACTTATAAGGTGGTTTGCCTCTGGGCATTGGAGTATGTAAAAAGAGGAACCTACAGCAAAGACTTTACAGTTTTGTAATTTCGTTGTATATAGTTCATATGATGATGacattaaaagttttttattatatatctcTATTGCAAGGAAAAAAACAACACTCGGGTTTCCTATCTTTTATAGTCATCCTTGTTTAAAACACCTGTAATTTAAATTTGAGGACATCAGTAGTGATAAAGTACTGCATTTAACATTTTATGAGTACTGTACAGAGAATGAAGACTTGGTTAACTAACTATTATTACTAACTTGCGGATTATGCAGCATTTCATAGCTGTATCACTGTGTCCCTGTAAAAGGGACActttgttgttttcatgttaatTTTCCCCCTATGTAATATACACTGTATTAATTTCAGACATGTGGAAAAAAAACAAGTGCCTCCGTCTTATTTAAAGTTTGCAGTTGTATTTGGCTGTTGGAATAAACGTGACTAAATATTA

Function

symbol description
adnp2a Predicted to enable DNA binding activity. Acts upstream of or within erythrocyte maturation. Predicted to be active in nucleus. Orthologous to human ADNP2 (ADNP homeobox 2).

GO:

id name namespace
GO:0043249 erythrocyte maturation biological_process
GO:0003676 nucleic acid binding molecular_function
GO:0003677 DNA binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-040914-55 Predicted to enable DNA binding activity. Acts upstream of or within erythrocyte maturation. Predicted to be active in nucleus. Orthologous to human ADNP2 (ADNP homeobox 2).

Ensembl:

ensembl_id ENSDARG00000060937

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00020960 False 6175 mRNA 0.43 3 25371653 25380969
TCONS_00020961 True 3724 mRNA 0.45 4 25373714 25380903

Neighbor

gene id symbol gene type direction distance location
XLOC_010712 rbfa coding downstream 3605 25364313 ~ 25368048 (-)
XLOC_010711 BX571853.1 coding downstream 29527 25339936 ~ 25342126 (-)
XLOC_010710 BX571853.2 coding downstream 43006 25328531 ~ 25328647 (-)
XLOC_010709 prelid3a coding downstream 86071 25275767 ~ 25285582 (-)
XLOC_010708 NA coding downstream 130585 25238250 ~ 25241068 (-)
XLOC_010714 pard6ga coding upstream 7534 25388503 ~ 25393699 (-)
XLOC_010715 zgc:136493 coding upstream 13794 25394763 ~ 25400257 (-)
XLOC_010716 dtnbp1a coding upstream 123140 25504109 ~ 25535430 (-)
XLOC_010717 atxn1b coding upstream 174340 25555309 ~ 25568512 (-)
XLOC_010718 fam8a1b coding upstream 212370 25593339 ~ 25597909 (-)
XLOC_010626 CR392024.2 misc downstream 4476478 20895112 ~ 20895175 (-)
XLOC_010704 NA non-coding downstream 298761 25068504 ~ 25072892 (-)
XLOC_010703 BX539313.3 non-coding downstream 359255 24999679 ~ 25012398 (-)
XLOC_010732 NA non-coding upstream 990728 26371697 ~ 26379456 (-)
XLOC_010734 CR391910.2 non-coding upstream 1122124 26503093 ~ 26507404 (-)
XLOC_010737 CR391910.3 non-coding upstream 1220031 26601000 ~ 26601433 (-)
XLOC_010738 BX537166.2 non-coding upstream 1238644 26619613 ~ 26642034 (-)
XLOC_010740 NA non-coding upstream 1338911 26719880 ~ 26731928 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000027_05851916_05856738 ADNP2A coding CI01000027 null 5851328 ~ 5856879 (-)