CI01000080_01378001_01380645


Basic Information

Item Value
gene id CI01000080_01378001_01380645
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000080
NCBI id null
chromosome length 5175454
location 1378001 ~ 1380645 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000080_01378001_01380645.mRNA
ATGGAGGATCATTTTAAAAGAACTCCATCTAAAAACAACACATGCCAGTCGTCACCTGAGGACTGGTTCAAGAGAAGGCAGAGATCAGTAGACAATCAGTATGACGTGGCACCAAGGATGCATGGCTTCAACAGCAGCTTTCACACCAACAGGAGCGCTGATCTCAAAACCCGCAGTGGTTTGAAAGACGGTTCAAACAAGCAAACTGGAAAGATGTTGAAGGACAACAGAGATGAGCCTTCCTCTCAGGACAAAAGAATCAGCAGGAGATCAACAGACAGAGGTTACAGAGGGTCCAGACCTTCCCCAAACCCCGCTGACAGAGCCAAATCGGGCATTACATGTAGCACATTTGAAATGAAACTTGCCGATTTCCCTGAATTGGGTGATATCACACCAGGCAACCATACAGCAGCTTCCCTGCACCAGGAACCAACAGTATGTGCTAGTGCAGTCATGCCAGCAGAGTGTCAGAGTTCACCAGCACTCGTTTGTAAGAATGTACCAAAACGAAGAACCAAGTCTGCACAGCAAGTCTCGTCCAGTGGAAAGTGTGAAATGTCAGTAGCTATCGCAGCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000080_01378001_01380645.mRNA True 580 mRNA 0.48 5 1378001 1380645

Neighbor

gene id symbol gene type direction distance location
CI01000080_01369811_01377361 NA coding downstream 640 1369622 ~ 1377361 (-)
CI01000080_01333090_01343070 MALT1 coding downstream 34931 1333090 ~ 1343070 (-)
CI01000080_01322747_01325626 EMB coding downstream 52375 1322584 ~ 1325626 (-)
CI01000080_01298042_01314713 NA coding downstream 63028 1297573 ~ 1314973 (-)
CI01000080_01268777_01277656 NA coding downstream 100004 1268203 ~ 1277997 (-)
CI01000080_01382486_01387517 MFSD10 coding upstream 1605 1382250 ~ 1387517 (-)
CI01000080_01396194_01413199 GLDC coding upstream 15511 1396156 ~ 1413279 (-)
CI01000080_01423592_01425914 NA coding upstream 42334 1422979 ~ 1425914 (-)
CI01000080_01442459_01464557 JAK2B coding upstream 61340 1441985 ~ 1467006 (-)
CI01000080_01500308_01505160 NA coding upstream 119232 1499877 ~ 1505414 (-)
G291017 NA non-coding downstream 49600 1328163 ~ 1328401 (-)
G290914 NA non-coding downstream 56461 1315593 ~ 1321540 (-)
G291014 NA non-coding downstream 84755 1292930 ~ 1293246 (-)
G291013 NA non-coding downstream 85205 1292484 ~ 1292796 (-)
G291002 NA non-coding downstream 133322 1244457 ~ 1244679 (-)
G291025 NA non-coding upstream 55584 1436229 ~ 1436730 (-)
G291026 NA non-coding upstream 99208 1479853 ~ 1480082 (-)
G291027 NA non-coding upstream 99723 1480368 ~ 1480633 (-)
G291028 NA non-coding upstream 100632 1481277 ~ 1481483 (-)
G292040 NA non-coding upstream 106157 1486802 ~ 1487137 (-)
G290314 NA other downstream 969857 407885 ~ 408144 (-)
G290261 NA other downstream 1048484 327689 ~ 329517 (-)
G290197 NA other downstream 1098154 272397 ~ 279847 (-)
G292089 NA other upstream 255117 1635762 ~ 1693395 (-)
G292349 NA other upstream 1137433 2518078 ~ 2525409 (-)
G292387 NA other upstream 1352942 2733587 ~ 2743246 (-)
CI01000080_03207204_03212602 NA other upstream 1828340 3207204 ~ 3212913 (-)
G292714 NA other upstream 2334836 3715481 ~ 3728010 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_031616 NA non-coding NC_007116.7 CM002889.2 66239915 ~ 66244132 (-)