CI01000080_01993914_01996596


Basic Information

Item Value
gene id CI01000080_01993914_01996596
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000080
NCBI id null
chromosome length 5175454
location 1993448 ~ 1996622 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000080_01993914_01996596.mRNA
ACACACCTGACTGACTGACACTGGACATGATGCAGTCCTCCTCTCCGACCGATCTTCGCAAGACGATCCCCGCAGCTGACGACTTCCTCATGTGGCGGGACTATATGAATCTTAGCAGGACTCTATCCCAACTGCTGGAGGAGCATCGCGACGAAAGGCAAGCCGTAACTGCGCGTGAGTGCCCCGCGGAGCGATTCATCAAGAGAACCGACTCTTCCAGCAGCACCTCCAGCACCAATGTCTCTTCCTCCAGCCGGGACCACCGCCGTGACACCTGCGGCTTCTGTCTGCAAAATGGAGAGAGTGAGGAGGTGTACATGAGTCATAGACTGAAAGCCCGAGACGGACGGATCCTCTGCCCGATCCTACGAAGTTATGTCTGTCCTTTCTGCTCTGCGACCGGAGACTGGGCGCACACGCGCCAATACTGTCCTCGGAGAGCATCGAAGACCAACAGAATAAGTGCACAAGGAGAGTATTTGCAGTTAACAGCAACTGAGCAGATGAAGGGGATCAGTCCAAGGCAGGTATTTGGAGACACACTCTTGGGAAATAGGAGACTGGAAAAGGAATCCGGAGGGAGTGGTAACGAGGAGAATAACACAGACATAACATAAATAGTACATTTGTATCACACAATGCTTTAGTGGGTTCTAGTCATAGACCAGACAATTACTGTGTGTGTGTGGCCTACATTTTCTTGATTATCCATAAAGATTTACTGGATCTGCACCATCCATAAGAAATTACAACTGAAAGCACCAGGAAAATGTACTCAAACCTCTGTTTTCTGCTCTATTATTGTGTCCTCGATACATGAATAGGCCTACATAAAAAATGATTTTCATTAAAACAATATACAGTAAATAGGCCTATACTTTTTAATTCCAAATCTATATTTGAATACACGAATACATCAGTAAAAAAAAAAAAAAATGGAACAGTTTATTGAACCTTTAGACAAAACATAAAAAGAAACTTTTTAAAAAAAATGTGCATGCTTTATGTTTTGTATCATAAAACATAAAGCACGCAAACTTTTTTAAGAGTTTCTTTTTATGTTTTGTCTAAAGGTTCAATAAA

Function

NR:

description
Nanos protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000080_01993914_01996596.mRNA True 1083 mRNA 0.43 3 1993448 1996622

Neighbor

gene id symbol gene type direction distance location
CI01000080_01987220_01990307 PTRH1 coding downstream 2751 1986498 ~ 1990697 (-)
CI01000080_01980939_01981859 NA coding downstream 11249 1979746 ~ 1982199 (-)
CI01000080_01954854_01959161 CFAP157 coding downstream 34124 1954691 ~ 1959324 (-)
CI01000080_01732531_01763618 KCNT1 coding downstream 229830 1732390 ~ 1763618 (-)
CI01000080_01726615_01730435 NA coding downstream 263013 1725989 ~ 1730435 (-)
CI01000080_02015292_02021186 PMPCA coding upstream 17762 2014384 ~ 2021587 (-)
CI01000080_02057026_02085109 PTGS1 coding upstream 58773 2055395 ~ 2085109 (-)
CI01000080_02113135_02116388 NA coding upstream 116472 2113094 ~ 2116388 (-)
CI01000080_02117016_02119929 PPIL3 coding upstream 120164 2116786 ~ 2119929 (-)
CI01000080_02122386_02126617 LRRC8AA, LRRC8AB, LRRC8A coding upstream 125686 2122308 ~ 2127055 (-)
G292197 NA non-coding downstream 454 1992714 ~ 1992994 (-)
G292176 NA non-coding downstream 26882 1962538 ~ 1966566 (-)
G292096 NA non-coding downstream 180476 1812411 ~ 1812972 (-)
G292102 NA non-coding downstream 268423 1724695 ~ 1725025 (-)
G292214 NA non-coding upstream 93383 2090005 ~ 2090238 (-)
G292242 NA non-coding upstream 214221 2210843 ~ 2211065 (-)
G292262 NA non-coding upstream 266992 2263614 ~ 2266106 (-)
G292339 NA non-coding upstream 494492 2491114 ~ 2517180 (-)
G292387 NA non-coding upstream 736965 2733587 ~ 2743246 (-)
G292089 NA other downstream 321528 1635762 ~ 1693395 (-)
G290314 NA other downstream 1585304 407885 ~ 408144 (-)
G290261 NA other downstream 1663931 327689 ~ 329517 (-)
G290197 NA other downstream 1713601 272397 ~ 279847 (-)
G292349 NA other upstream 521456 2518078 ~ 2525409 (-)
CI01000080_03207204_03212602 NA other upstream 1212363 3207204 ~ 3212913 (-)
G292714 NA other upstream 1718859 3715481 ~ 3728010 (-)

Expression


Co-expression Network