CI01000080_02675714_02724087 (DNM1A, DNM1, DNM1B)


Basic Information

Item Value
gene id CI01000080_02675714_02724087
gene name DNM1A, DNM1, DNM1B
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000080
NCBI id null
chromosome length 5175454
location 2675714 ~ 2724087 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000080_02675714_02724087.mRNA
GATGCACATGCCTCTGTTGAGGAGAATGACAATCAGGTGAATACGGGAGTGAAGCAACTGGTGCTCCCCTCCGATCTATGGCCTATGCCCTATGTTTTATTTTTAGTGTCATTCAGGTTTGATTTGTTTTATACAACAAGTATCACAAACATTGTACTGAAGAACGATAATTTCCTTAAGCAGTGGCTGGAAACGGTATTGCAGCATCCAGCGCTTCATCACCGCATCGCTCCTGCAGATCTCATAGCTGTGGTGAACAGGCAGGGAGCAGCACGTTGGGAGGACGTATGTCGATTCGCCAAGATGGGCAATCGGGGAATGGAGGACTTGATTCCTCTGGTAAACAGAATGCAGGATGCTTTCTCTGCCATCGGACAAAATGCCAACCTGGACCTTCCTCAGATCGCGGTGGTCGGTGGCCAGAGTGCTGGAAAAAGCTCGGTATTGGAGAACTTCGTTGGGAAGGACTTTCTGCCTCGTGGCTCTGGTATTGTCACTCGGCGCCCCCTAGTGCTGCAGCTGATCAACTGCCCTACTGAATATGCAGAGTTTTTGCATTGCAAGGGGAAGAAGTTTACTGATTTTGATGAGGTTCGTCAGGAGATTGAGGCAGAGACAGATCGCATCACTGGCCAAAACAAAGGCATTTCACCTGTCCCTATCAATCTGCGCGTCTATTCACCTCATGTATTGAATCTCACCCTCGTGGACTTGCCTGGTATGACCAAAGTGCCTGTAGGTGACCAGCCGGCTGACATTGAGTTCCAAATCAGGGATATGCTAATGCAGTTTGTGACTAAGGAGAACTGCTTGTTGCTGGCTGTGTCTCCTGCAAACTCTGACCTGGCCAACTCAGATGCCCTCAAGATTGCCAAGGAGGTGGACCCTCAAGGTATGAGAACTATAGGTGTGATCACTAAATTGGATCTAATGGATGAAGGAACTGATGCACGTGAAATCCTGGAGAACAAGCTTCTTCCTTTACGCAGAGGTTACATTGGGGTTGTGAACCGCAGTCAAAAGGACATTGATGGCAAGAAGGACATTACTGCTGCCATGGCAGCAGAGAGGAAGTTCTTTCTCACCCACCCAGCCTATCGACATTTGGCTGATCGAATGGGGTCTCCCTACCTGCAGAAAGTGCTTAATCAGCAATTAACTAATCACATCCGAGACACCCTGCCAGGACTGAGGAATAAACTTCAGAGCCAATTACTGTCCATTGAGAAAGAGGTGGAGGAGTACAAACACTTCCGCCCCGATGATCCTTCTCGCAAAACCAAGGCTCTGCTACAGATGGTGCAGCAGTTTGCAGTGGATTTTGAGAAGTGCATTGAGGGTTCAGGAGATCAGGTGGACACAGTGGAACTTTCCGGAGGTGCAAGGATCAATCGCATCTTCCATGAGCGCTTCCCCTTTGAGCTGGTTAAGATGGAGTTTGATGAAAAAGAGCTGCGTAAGGAGATAAGTTACGCCATCAAGAACATCCACGGTATCAGGACCGGTCTGTTTACTCCAGACATGGCCTTTGAGACTATTGTTAAACGGCAGATTGCAAAGATCAAAGAGCCATGCCAGAAATGTGTGGACCTGGTCATCACCGAGCTGGTCAATACGGTCAGGCAATGCACCAAGAAGCTGGCTCAGTACCCCATGCTTAGAGAGGAAATGGAGAAGATTGTCACCCAACACATCCGTGATCGGGAGAGTCGCACCAAAAATCAGGTCATGTTGCTAATTGACATTGAGTTAGCATACATGAACACCAATCATGAGGATTTCATCGGTTTTGCAAACGCCCAGCAGAGAAGTAGTCAGATGAATAAGAAGAAGACTGCTGGCAATCAGGTTATCAGAAAGGGTTGGCTAACCATCAATAATATTGGCATCATGAAAGGAGGAGCGAAGGAATATTGGTTTGTCCTGACCGCTGAGAATCTGTCCTGGTACAAAGATGATGAGGAGAAAGAGAAGAAGTACATGCTGCCATTGGACAACCTGAAGCTCAGAGATATAGAGAAAAGCTTCATGTCCAGCAAACACGTGTTTGCTCTCTTTAACACTGAACAAAGGAACGTGTATAAAGACTACAGGCAACTGGAATTAGCTTGCGACACTCAGGAGGAGGTGGACAGCTGGAAGGCATCCTTCCTACGAGCTGGAGTCTACCCAGAGCGCATCACTCAGAGTGATGCCAGTGAGGAGAACGGCTCGGATCGCTTCATGCACTCCATGGATCCACAGCTTGAGAGGCAGGTGGAGACCATCAGGAACCTTGTGGATTCCTACATGGCCATCGTCAACAAGACTGTGCGGGACCTCATGCCCAAGACCATCATGCATCTCATGATCAACAATACTAAGGACTTTATCCATGCTGAGTTGCTTGCTAACTTGTACTCATGTGGAGACCAGAACACTTTAATGGAGGAGTCAGCAGAACAGGCTCAGCACAGGGAGGAGATGCTGCGCATGTACCACGCTCTGAGAGAGGCCCTCAACATCATTGGTGACATCAGCACCACCACAGTCTCCACTGCCATGCCTCCACCGGTGGATGACTCCTGGCTACAGGTACAAGGAGGACCTTCAGGGCGCAGCGCCGGGCCCCACCTGGGCCCCCTCGTCCAGGTGGACGCACCGCTCCAGGGCCCCCTACTGCTGGAGCACCTCCTGTGCCATCCAGACCTGGAACCTCTCCTGACCCCTTCAGTGGCCCCCCGCCCCAGGTCCCCTCTCGTCCTAACCGTGCACCACCAGGTGTCCCCAG

Function

symbol description
dnm1a Predicted to enable GTPase activity and microtubule binding activity. Predicted to be involved in receptor internalization and synaptic vesicle endocytosis. Predicted to act upstream of or within endocytosis. Predicted to be located in cytoskeleton. Predicted to be active in several cellular components, including microtubule; plasma membrane; and synapse. Is expressed in muscle and somite. Human ortholog(s) of this gene implicated in developmental and epileptic encephalopathy 31. Orthologous to human DNM1 (dynamin 1).
dnm1b Predicted to enable GTPase activity and microtubule binding activity. Predicted to be involved in receptor internalization and synaptic vesicle endocytosis. Predicted to act upstream of or within endocytosis. Predicted to be located in cytoskeleton. Predicted to be active in several cellular components, including microtubule; plasma membrane; and synapse. Human ortholog(s) of this gene implicated in developmental and epileptic encephalopathy 31. Orthologous to human DNM1 (dynamin 1).
dnm1 Enables identical protein binding activity. Involved in endosome organization and receptor-mediated endocytosis. Located in nucleoplasm. Implicated in developmental and epileptic encephalopathy 31. Biomarker of Alzheimer's disease.

GO:

id name namespace
GO:0003374 dynamin family protein polymerization involved in mitochondrial fission biological_process

KEGG:

id description
K01528 DNM1_3; dynamin 1/3

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000080_02675714_02724087.mRNA True 2770 mRNA 0.50 21 2675714 2724087

Neighbor

gene id symbol gene type direction distance location
CI01000080_02626826_02665868 NA coding downstream 9846 2626586 ~ 2665868 (-)
CI01000080_02396817_02403243 NA coding downstream 272471 2396817 ~ 2403243 (-)
CI01000080_02377623_02390372 QSOX2 coding downstream 284433 2376786 ~ 2391281 (-)
CI01000080_02371817_02374191 NA coding downstream 301523 2371747 ~ 2374191 (-)
CI01000080_02343279_02346069 NA coding downstream 329642 2342508 ~ 2346072 (-)
CI01000080_02890744_02893801 BRAFLDRAFT_57441, RAB14L, RAB14 coding upstream 166447 2890534 ~ 2893801 (-)
CI01000080_02901179_02916041 NA coding upstream 177028 2901115 ~ 2917643 (-)
CI01000080_02998252_03001018 NA coding upstream 274021 2998108 ~ 3001673 (-)
CI01000080_03135523_03147452 PDXKA, PDXK coding upstream 410925 3135012 ~ 3147452 (-)
CI01000080_03187019_03196643 PKNOX1.1 coding upstream 462404 3186491 ~ 3196643 (-)
G292339 NA non-coding downstream 158534 2491114 ~ 2517180 (-)
G292262 NA non-coding downstream 409608 2263614 ~ 2266106 (-)
G292242 NA non-coding downstream 464649 2210843 ~ 2211065 (-)
G292214 NA non-coding downstream 585476 2090005 ~ 2090238 (-)
G292197 NA non-coding downstream 682720 1992714 ~ 1992994 (-)
G292387 NA non-coding upstream 9500 2733587 ~ 2743246 (-)
G292409 NA non-coding upstream 29048 2753135 ~ 2754693 (-)
G292411 NA non-coding upstream 31435 2755522 ~ 2755838 (-)
G292412 NA non-coding upstream 35028 2759115 ~ 2759350 (-)
G292418 NA non-coding upstream 53984 2778071 ~ 2778339 (-)
G292349 NA other downstream 150305 2518078 ~ 2525409 (-)
G292089 NA other downstream 1003794 1635762 ~ 1693395 (-)
G290314 NA other downstream 2267570 407885 ~ 408144 (-)
G290261 NA other downstream 2346197 327689 ~ 329517 (-)
G290197 NA other downstream 2395867 272397 ~ 279847 (-)
CI01000080_03207204_03212602 NA other upstream 484898 3207204 ~ 3212913 (-)
G292714 NA other upstream 991394 3715481 ~ 3728010 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location