CI01000080_02998252_03001018


Basic Information

Item Value
gene id CI01000080_02998252_03001018
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000080
NCBI id null
chromosome length 5175454
location 2998108 ~ 3001673 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000080_02998252_03001018.mRNA
AATCTCTCACCTGTGAATGCAGATGCTGATGGTGATTATCAGAAGGACCATAATGACTCCTATGCAGGACTGTGTTGATTTAGATTTTGATGGGAATTATTTTATGTATATCTACTCTGAGGACTTTAATTTTGAAAAGCAGTCACAATTAGCCTCTTAGTTCAGAAAGCAGGAAGTACCAGTTGTACTGCAGAAATTCAGAAAAATTGTGGTAGCTGTGACATCCCCAAACATCTTCTTTCTTTGCATCTGTTAAACGCAATGTCTGTAAGTACACAGTGTTCATTTATTGTGTGATATGTTTGAGAAGGTTATTTTGATATTTTGATGTACATTTTCTTGGTTTATTTAACCTTACTTTATCTTTAATCTTTCAATTTCATACTTAGTAATATTGTCTTTTGTATATTTTTACAGTTTCACAGTTGAATCATAAACTTCATAAACGACTTGATGTCTCCAGCAAAGTTTTTTGAGTCACTGTTTAACTTACTGGATAGTTAGATGCTAGAGAATTCTAACAAGGCCAGTACAGTGAAAAGACATTAATACAACAGACTGAGAAGGATGCTCAAGAATTGTGTGGAATCAAGATTTAGACATTCCAAGGACTCACATCAATCTGATTTTTCTGCATATCAAGTACTATATAAGCATGGCAGAAGGTCGGACAGACTCAGCAGATCTTAAAGGCACAGCCGAAGAGGTGCACTTTGTCAGCGCACATTCCTCAAAAGCATCCAGTCGTTCCTCAAGAGCATCCAGTCGTCACTCAAGTGCCAGCATAGGGGTTTTCAAAGCAAGTGCAAAAGCAGAAGCCGCGCAAGCCAGAGCAGCGCACGCTAAAAGAGAAATAGAATTGAAAGTTGAACAGACGCGTCTTCAAGCAACACTGGAGGCTTTGCAAGAGGAAAAAGAAAAGGATGCTGCTTTAGCAGAAGCTCATGTACTGGAGGAAGCATTGTTAGAAACGGAGCGTAGCACAGCCAGTAGAGTATCAGTTCCTGTTCCCATCGAGGACAGTCGAAGTCGAACAGCAGATTATGTGAAAACACAATCTAAGATTATGGACAAAGAGTTTTTTCAGGACAGTGGCAGCAGTTGGGTTGCGCCACTACCCTTTCGTGAGCCCAGACAAAGTCTACCCACCAACAAAGACTACGCATTGAAACGTCTTCTTGCGCTGCGACACACTCTGAACAAGCGACCGCAAATGAAAGTACACTTCCTGGATTTTATGGAGAAAAATCGTGCTATAGAGACTGAACTAGTAAAGGAAGAAGTGAAGACAAATGGAAATGCCTGTAAGACAGCTGATGAGTTTATTGAAGCTAATGTTGCATAATAATGACTAAATAATGAGGAACGACTTATGATTTTACACTGTCATCCATGTGCTTGAAATATATGAATATCAGAGTTAGCAACACAACCTTTTAATCAAACTGAATTCAGTAATCTTTAAATGGTGTACATACAGCACTATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000080_02998252_03001018.mRNA True 1489 mRNA 0.39 2 2998108 3001673

Neighbor

gene id symbol gene type direction distance location
CI01000080_02901179_02916041 NA coding downstream 80465 2901115 ~ 2917643 (-)
CI01000080_02890744_02893801 BRAFLDRAFT_57441, RAB14L, RAB14 coding downstream 104307 2890534 ~ 2893801 (-)
CI01000080_02675714_02724087 DNM1A, DNM1, DNM1B coding downstream 274021 2675714 ~ 2724087 (-)
CI01000080_02626826_02665868 NA coding downstream 332240 2626586 ~ 2665868 (-)
CI01000080_02396817_02403243 NA coding downstream 594865 2396817 ~ 2403243 (-)
CI01000080_03135523_03147452 PDXKA, PDXK coding upstream 133339 3135012 ~ 3147452 (-)
CI01000080_03187019_03196643 PKNOX1.1 coding upstream 184818 3186491 ~ 3196643 (-)
CI01000080_03199317_03204484 NA coding upstream 197527 3199200 ~ 3204484 (-)
CI01000080_03207204_03212602 NA coding upstream 205531 3207204 ~ 3212913 (-)
CI01000080_03225699_03250598 PDE9A coding upstream 223894 3225567 ~ 3251467 (-)
G292486 NA non-coding downstream 13699 2983926 ~ 2984409 (-)
G292470 NA non-coding downstream 54537 2943228 ~ 2943571 (-)
G292467 NA non-coding downstream 70082 2927265 ~ 2928026 (-)
G292461 NA non-coding downstream 145537 2852157 ~ 2852571 (-)
G292460 NA non-coding downstream 146034 2851861 ~ 2852074 (-)
G292496 NA non-coding upstream 26628 3028301 ~ 3028510 (-)
G292498 NA non-coding upstream 29889 3031562 ~ 3032341 (-)
G292503 NA non-coding upstream 50965 3052638 ~ 3052855 (-)
G292505 NA non-coding upstream 57423 3059096 ~ 3059348 (-)
G292506 NA non-coding upstream 58532 3060205 ~ 3060404 (-)
G292387 NA other downstream 254862 2733587 ~ 2743246 (-)
G292349 NA other downstream 472699 2518078 ~ 2525409 (-)
G292089 NA other downstream 1326188 1635762 ~ 1693395 (-)
G290314 NA other downstream 2589964 407885 ~ 408144 (-)
G290261 NA other downstream 2668591 327689 ~ 329517 (-)
G292714 NA other upstream 713808 3715481 ~ 3728010 (-)

Expression


Co-expression Network