CI01000080_03199317_03204484


Basic Information

Item Value
gene id CI01000080_03199317_03204484
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000080
NCBI id null
chromosome length 5175454
location 3199200 ~ 3204484 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000080_03199317_03204484.mRNA
CCATAGAGGCCGATGAGAGAGCCTCTCTTCTAGCCTACAAGCCCGCTGTGGCCTTCCCTTCTAAGCTGTCTGCCACAGGATTTCTTCTCAAAGACGTAGCTTTAGGTGAGTCTGAAACTGCTGAGGTGGTTTCCACAGCTGCTGCAAGCGAGACGACAACTGACAGTCCTGTTGCTGATACGGCAGCAGCTGACATTGCTGTAGAAGAGGCAAAGATCACTGAAGTCCCACCTACTGATGGAGCCACTACAGAAAGTGAAGGAAGTAAGACCTCAGATGTTAAGGCAGAAGTACAGAAAGATCAAGACGTTACCTCTTCCTCATCCTCCAGTGATTCTGATTCAGACTCTGATTCTGATGATGAGAAACCAAAGACTGAAACCCTGGTGCAGTCTGGAGACAAAGCAGCAGAGGAGAAGAAAGCTCCTAGTCTGACAATTGAAGAAGTAGGTGTTCCAGATAAAGAAGCAACGTCTGAAACTGCCTCATTTGAAGAAGCTCAAGAAAGTAATGAAACTGTGACTAAAGCAACACCAGAAGAGGTTCCTGTGCCAAGTGCTAAACCAGTTGGATCAGCGGAGACCCTTATTGATCCTGCCCCTGTTATATCCTCCATGACTGAAGCAATTCCTGAAGTTTCCGGTGAATCCATTACAGTTGCCACTCCTGACAAGATAGTGGACACTGCAACAGAAATTAAAACGGCTCCTACAGAGGAGATTGCTGTTGAAAAGGAACTGGAAATTAAAGTTGAAGATAAACCAGAAATTAAAGTTGAAGATAAACCAGAAATTAAAGTTGAAGATAAACCAGAAATTAAAGTTGAAGAGGCTGCAAAAGTTTCTGCAGAAGTTGTCCCAAAAGTCACTACAGAAGCCGGGTCTGAAGAAGTAGCTGACACCGCTTTCGAATCTAGTCCTGAAGCATCTCCTGAGGCTCCTGGAGATGTTGCTGCACCCAAAGCAGAGGCAGGAACGCTGGCAGCCGTTTCAGAAGAGCTGGTAGACACTGCACCTGTGACCGCTGATGCTGTAGAGGCTCTGGCTGAGACGGACGTTGTGGAAACACCTGAGGAAAAAGCCCCAGAGAAAGCCCCGGAGCCAGAGCCGGAGCCTGAACCCTTTGACAACACCACGTACAAGAACCTGCAACACCACCACTACAACACGTACACCTTTGCTGATATGGATGTAGAGATGTCGAAACACCGTCTGCCCCAGCCTTCCGCAGGCAGGCACTGAGTCTTCATCGCGTGGCCTGTATTATTGTCCACAACCCTGTTTCTTCCCCATGTTCCTTTGTTCTTCAGATAGTTTGCTGACAAATAGCAAGCTTTATGCTATAATTCTGAAATTAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000080_03199317_03204484.mRNA True 1358 mRNA 0.47 2 3199200 3204484

Neighbor

gene id symbol gene type direction distance location
CI01000080_03187019_03196643 PKNOX1.1 coding downstream 2557 3186491 ~ 3196643 (-)
CI01000080_03135523_03147452 PDXKA, PDXK coding downstream 51748 3135012 ~ 3147452 (-)
CI01000080_02998252_03001018 NA coding downstream 197527 2998108 ~ 3001673 (-)
CI01000080_02901179_02916041 NA coding downstream 281557 2901115 ~ 2917643 (-)
CI01000080_02890744_02893801 BRAFLDRAFT_57441, RAB14L, RAB14 coding downstream 305399 2890534 ~ 2893801 (-)
CI01000080_03207204_03212602 NA coding upstream 2720 3207204 ~ 3212913 (-)
CI01000080_03225699_03250598 PDE9A coding upstream 21083 3225567 ~ 3251467 (-)
CI01000080_03259702_03274657 SLC37A1 coding upstream 54889 3259373 ~ 3274657 (-)
CI01000080_03309401_03310494 HTR1FA coding upstream 104853 3309337 ~ 3310494 (-)
CI01000080_03390711_03395563 NA coding upstream 186143 3390627 ~ 3395563 (-)
G292567 NA non-coding downstream 22027 3176550 ~ 3177173 (-)
G292565 NA non-coding downstream 24942 3173977 ~ 3174258 (-)
G292563 NA non-coding downstream 26647 3172287 ~ 3172553 (-)
G292562 NA non-coding downstream 26995 3171998 ~ 3172205 (-)
G292560 NA non-coding downstream 28055 3170453 ~ 3171145 (-)
G292590 NA non-coding upstream 136587 3341071 ~ 3380066 (-)
G292596 NA non-coding upstream 179229 3383713 ~ 3386192 (-)
G292606 NA non-coding upstream 187303 3391787 ~ 3423582 (-)
G292623 NA non-coding upstream 211940 3416424 ~ 3453582 (-)
G292387 NA other downstream 455954 2733587 ~ 2743246 (-)
G292349 NA other downstream 673791 2518078 ~ 2525409 (-)
G292089 NA other downstream 1527280 1635762 ~ 1693395 (-)
G290314 NA other downstream 2791056 407885 ~ 408144 (-)
G290261 NA other downstream 2869683 327689 ~ 329517 (-)
G292714 NA other upstream 510997 3715481 ~ 3728010 (-)

Expression


Co-expression Network