CI01000080_03972165_03981008


Basic Information

Item Value
gene id CI01000080_03972165_03981008
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000080
NCBI id null
chromosome length 5175454
location 3972131 ~ 3982765 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000080_03972165_03981008.mRNA
ATTTATCTTGTTTTGTCCATCATCTTGTTTGAATTTGGCCAAAAAGTTATCTTAGAAGATTGCATAATCATACTACTTACATTGAAAACACATCTACAGTGCCTTCAAATACTGCTTATGTACCCAGCAAACTGCTAAGGCAGAATCATAACCATCATGGAACCTCATAAGTGACTGAATTGATACTGTCTACACAGGCAGCAACTCATTATAATGGCCACACACACACCCCACAAAATGTTTTGCTTTGAACTTTTATTGGCCTTAAGCGAAACTCCCAAATGCGCAAATTTCTATTAAAATCACGTCTGAGAAATTTCGCAAAGCAACAGTAAATGTGACCACTAGTGTTGTTTTACTGGAGAGACCGGTCTTAAGACCATTTTTTGAAGGTCTTGTTCTTATCTTGGTTTCGACTGCATTTGTTTTTGGTCTTGTCTTGGTCTCAGACTATGAGGACTCTGGATTTTATTTCAAGACCGGTCAAGACCACGGTTCTGAGGATATCGTTAAATTGTCAGTGCATTGTCTGATTTATTACCATAACTAATGTGATTGGATGTAAAACTTCTTTCTTCAGATGCAATCAATAATTATTTCGAATTTGATGTATTTATACTGTTGTGCTGGTTCAGAAATTAATGAGGGAATAATACAAATGGCCATAAAATTTGAAGATATTATTGCAAAAATGTACTTGTAAGAGATATGGATTTTTATATTACAAAATATGATATAATTTTATATATATATATATATATATATATATATATATAACGAGAGCAGGAGATCTGTTTTCACAAATTTGAGCACAATTGCAAACGTGATATCGATTTTATACAAATGTTCAATAAACAAAACACAAAGCATTGTTTAGGCATTTGTAATTTTACCAATTCAGATGCAACTTCTGTGCCACCTCTAGTGTAACAATGATTTTTTTATTTTTTTTTTTTTGGTTAGTGATTTCATTTGATTGTATACAGCTCTATATAGTGTCCTATTATTCTAATTGTATTTATTGATTAAAAATAATAAATTTCTCAGGCAGTAAATGTGGATCTTTCAGATTAATTTGAGTGCTGATCTGGTCTTGGTCTTGACTCGGTCTCGCCTTGCCTTGGTCTTGGTCTTGTCTTGGTCTCAACATACACTGGTCTTGGTCTTGGATTAGGTGGTCTTGACTACAATACTAATGACCACACCTTCACACTAAAGGCCTATTGACACCAAGAAAGATAACTATAAAGAAAACTATAATGGTATATAACTATAACTATATTAGCATCCACATAAATGCACAATAACTTTCTGTTTATTATTAGTGCGCACAAAGTCTGCCGCTTAAAATGCTTGAGCTCTTTATAGTTGGGTGAAATCTGATTGGCTGTCAATGTTTTTATTGTTCATCAGCTGAAAAAAAAATTGCTCTGAAAGTGATTCCAATGATATACTTTAGTTCCTCTGTGTCATTTTAGTTAGTTGTGGTGTTGATGTCCCTATTCCCATAGAGTTAGGACAATTATTTAACCTTAGTCATTGTTATAGATAAAGCTTTGTGTGAACGGGCCTTTACAATTGTTTTAAATAGTTTGGTGCTAGCATGTTGCTAAGCTAACAGCATGATAGCACAAAAATTGCATAAACACAAATATTTAGAGAAGTAGTCCAATTTAATTAGATGGTAGATCCAGTTTAATTTATCAACACGTAGAATTTAGCCTAAATATGGTGTCTTAGCTTTGGAACAATAAAAAATGTCTACGTTTTGGAACAGAGCTAATCTGTTTATCACTACTGGACCGACGAGTGTGAAGGAAGGGCTACTTCTGAAACAGACAAGCTCGTTCCAGCGTTGGAAAAAACGTTATTTCAAATTGCGGGGACGTACTCTCTACTATGCCAAGGATGCCAAGGCGGGTGGCGTTTTGGCCCGCTGGCAGTATCGAGTCTCTCGTAGCCGCGTGTGCTGGAGGGTGCTTTCCGTCTGCTGGACCGGTGCCCGCCGTCCGCCGCCCGTTCTTGGCGCCAGTGGATCGGAGGAAGGCTTGGTGGCGATTCGGTCTCTTATTTTCGATGAAGTGGATCTTTCAGATGCCAGTGTTGCCGAATCAAGCACAAAGAATGTCAACAACAGTTTCACGAAAAAAGAAATCGCCCACTGCCAGGAAAAACAACAGATGCTCATTATACTTATAAATTATTGAGAGGCCCATGTTGAAGCTTTTTTTTAGAAATAAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000080_03972165_03981008.mRNA True 2241 mRNA 0.36 5 3972131 3982765

Neighbor

gene id symbol gene type direction distance location
CI01000080_03925953_03961599 DGKH coding downstream 10314 3925530 ~ 3961817 (-)
CI01000080_03882251_03905283 AKAP11 coding downstream 66848 3882215 ~ 3905283 (-)
CI01000080_03871122_03871424 NA coding downstream 100246 3870817 ~ 3871885 (-)
CI01000080_03858298_03868014 TNFSF11 coding downstream 103852 3857803 ~ 3868279 (-)
CI01000080_03823638_03839211 NA coding downstream 132675 3823433 ~ 3839456 (-)
CI01000080_04006295_04009794 NA coding upstream 23416 4006181 ~ 4009794 (-)
CI01000080_04185680_04192219 RGCC coding upstream 202381 4185146 ~ 4192219 (-)
CI01000080_04196209_04198578 NA coding upstream 212297 4195062 ~ 4198578 (-)
CI01000080_04199562_04201445 KBTBD7 coding upstream 216502 4199267 ~ 4201597 (-)
CI01000080_04226079_04237658 SLAIN1A coding upstream 243263 4226028 ~ 4237658 (-)
G292843 NA non-coding downstream 102618 3869307 ~ 3869513 (-)
G292833 NA non-coding downstream 133953 3837979 ~ 3838178 (-)
G292726 NA non-coding downstream 209014 3762147 ~ 3763117 (-)
G292737 NA non-coding downstream 210240 3761519 ~ 3761891 (-)
G292863 NA non-coding upstream 39130 4021895 ~ 4022370 (-)
G292868 NA non-coding upstream 43595 4026360 ~ 4028482 (-)
G292905 NA non-coding upstream 154865 4137630 ~ 4140895 (-)
G292907 NA non-coding upstream 158308 4141073 ~ 4141365 (-)
G292906 NA non-coding upstream 158849 4141614 ~ 4142126 (-)
G292714 NA other downstream 244121 3715481 ~ 3728010 (-)
CI01000080_03207204_03212602 NA other downstream 753728 3207204 ~ 3212913 (-)
G292387 NA other downstream 1228885 2733587 ~ 2743246 (-)
G292349 NA other downstream 1446722 2518078 ~ 2525409 (-)
G292089 NA other downstream 2300211 1635762 ~ 1693395 (-)

Expression


Co-expression Network