CI01000080_04578958_04583985


Basic Information

Item Value
gene id CI01000080_04578958_04583985
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000080
NCBI id null
chromosome length 5175454
location 4578488 ~ 4584364 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000080_04578958_04583985.mRNA
AGCCCTCCTCAAGCATTCCCTTTCTTGGTGCACTCAAGATATCTAAGGAGGACCCAGAGGAGCTTGCTCGTCTCAGAGAGGGTCCCTTGGTGTTTGGCTCATTTCAAAACCTCTGCATTTTTCCCCCCTCTTCTCTCACTGTCAAAGCGCAGGCATCAAGCAACCCGCCGCATTCACATTTAATCTCTGACAAAGCCTGAGGTTGTTTGCAAGCACTTGTGCTTTTCAGAAAAGGTTTATTCTAGTCTCATAAATTCTACCGCTCTGCTGTGTCATCAGAAAATATCCGTGGCTCAGGAACCGAGCCGCAGGAGGGCATTTTATGTAACACACTGTTAACAAACAGAAGAGCATAGCGTGAGCGCCTGTCAGTGCGAGCATGGGTATTTATGAAGAAAGAGAGGGACATTCTCAACAGCTGTCTGAGGCCTCACAGCGTAGCTCTGTGCAGGGGACCTCTGATTTATGGCAGCGCTGCTCCCTGTACCCAGCCTGCACGGCGCGGCCCCTGCGTCACGGAGGTGGGCAAATGGAACACCTCCTTGTTGTCGGCTGTTGGCAGCTAGTCCTCCCACACAGGGACACAATAGAGATAGACAGTAATTCTTCTGCGGATGGATCCCTCCTCTCTCTACGGCTGTGTTGGCCACGGTTATCGCACTTGAGCTCTGCACGGAAGCGCGTCCTCTCCACAATAGCCAGAGGGAGTGGAGATTTATCAGTGGCAGCCGATTCCGTGTGGTCCAGCAACTCCAGAGGAATGGAGGGTCCTAAGGGGCCCCCGAAAAAGAGGCGGCCATAAACCTGCCACAATAGGGGATTAGGTGGTGGCCGATGCAGGGCTCCCATTGTGCTGGCTTCTGTAGCAGAGCAGTACATTCAGTACAATGGCACCAAGGAAGAGGGATGGCTCCGACAGGAGGACTCGCATTCTGAGAAGCTTTGAAAATTATGCTAATAGGCTTAGTTGTTTCAAAGCTACTTTCTCTCTTTTTCTTCCCTCTTTCTTCTTCTCCTGCTCTCAATTTGCTACAGGCATCATGGTGGCTTATTGAGACGTGTCAGGGGATTTTGGCGAAATGATGTCCTAAAATTACTGACTGACCCAGTCCCATGTAGCGCCTTAGCAAGAAAGATGCTGGAACATTTTTGCATATGTCTCACTCAGTTTTGCATGTGTTCGTATGCTATATTAAAGCAATATTCATGTAATATATTAACACAGTAATATCTTGTGGTTTACTTTTTTATATAAAACAGCAATATAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000080_04578958_04583985.mRNA True 1272 mRNA 0.48 4 4578488 4584364

Neighbor

gene id symbol gene type direction distance location
CI01000080_04517413_04566482 EPHA3 coding downstream 11793 4516905 ~ 4566695 (-)
CI01000080_04488197_04502798 NA coding downstream 73954 4487831 ~ 4504534 (-)
CI01000080_04380060_04382833 CLN5 coding downstream 195655 4380027 ~ 4382833 (-)
CI01000080_04239679_04243440 NA coding downstream 335048 4239385 ~ 4243440 (-)
CI01000080_04226079_04237658 SLAIN1A coding downstream 340830 4226028 ~ 4237658 (-)
CI01000080_04611752_04614340 EPHA3 coding upstream 26195 4610559 ~ 4614340 (-)
CI01000080_04778886_04784529 NA coding upstream 194247 4778611 ~ 4784529 (-)
CI01000080_04911814_04914963 NA coding upstream 327378 4911742 ~ 4914963 (-)
CI01000080_05119672_05121617 NA coding upstream 534692 5119056 ~ 5121754 (-)
CI01000080_05168869_05169303 NA coding upstream 582683 5167047 ~ 5169353 (-)
G293085 NA non-coding downstream 77054 4501156 ~ 4501434 (-)
G293056 NA non-coding downstream 145669 4432549 ~ 4432819 (-)
G293021 NA non-coding downstream 256815 4319053 ~ 4321673 (-)
G292975 NA non-coding downstream 360480 4217585 ~ 4218008 (-)
G292969 NA non-coding downstream 361336 4216817 ~ 4217152 (-)
G293093 NA non-coding upstream 52737 4637101 ~ 4637336 (-)
G293104 NA non-coding upstream 72389 4656753 ~ 4657005 (-)
G293209 NA non-coding upstream 123638 4708002 ~ 4708225 (-)
G293242 NA non-coding upstream 127623 4711987 ~ 4712189 (-)
G293255 NA non-coding upstream 154485 4738849 ~ 4739286 (-)
G292714 NA other downstream 850478 3715481 ~ 3728010 (-)
CI01000080_03207204_03212602 NA other downstream 1360085 3207204 ~ 3212913 (-)
G292387 NA other downstream 1835242 2733587 ~ 2743246 (-)
G292349 NA other downstream 2053079 2518078 ~ 2525409 (-)
G292089 NA other downstream 2906568 1635762 ~ 1693395 (-)

Expression


Co-expression Network