CI01000080_04911814_04914963


Basic Information

Item Value
gene id CI01000080_04911814_04914963
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000080
NCBI id null
chromosome length 5175454
location 4911742 ~ 4914963 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000080_04911814_04914963.mRNA
CTATGACAGGGTCATCCTCATTCTGTGCAAGAATTCCGATCTGCCTCGAGTTCCTGGTTTTTGGGGATTCCTATGAGACCGCAGATGTGCTCAACTTCATTGAGCAGTGCGAGAAATTCTTGGAGATCGGGCCCCTCCCCAGCACCGAGCTTTTAGGAACGCTGACTACTGTCCTGAGGGGACCAGCTCAGAGCTGGTGGAAGGCAGAGAAGGCAAAGGTAACTGACTGGAAGCAAAGACAAGAATCCAAAGAAAGCAGCAGAACGTACCTCCAACAAGAATCTCGCTGGGGTAACCCTGGTGCAAGCCCATCCTGTTACCTCTCTCCTGGTCGTGCCTGTGAAAGTGAATGGTTCATCATGGCTGATGGTACCATTCACCAGACCAGAGAACTGCGAAAGATGTGGCATGATAAAGAGTGCAATGTGAACACCTATATATTGAAGGATACCCACCTCGCCTTTCCACCAATTGCCAGGCTGGACTTCTTGAGCACCACAGGAGCTATTTTGGAAGTGGGGCAAGGCAGATATGGCTTACGGTCGGGAAAGGGATACATCCATCACCCATTCTTACCAACCTTAAGCCCAATAGCAGGAACAGCTATACCTTCTGAACCTGCACATTCTCTCACAGCTGCCAAGCTGAACCTATACTATGCCTTACCCCCTACAGGTAGACTTCCTAAACTAGCCACCTTCACCCCAGAGCACACTCAGTGGGACTCTGATAACCAGGAAGAGCTGTTGAAGTTAATCTCCGCCTGGCCACATATCACCTCGAACAGCCTGGGTAAAACATTGGTTGTGCAGCATAAAATCGTATTAACTGATGACATACCCTTAAAATCCTGTCCATACAGAGTCTCTCCTCTAAAAAAGCAAATCGTCGAGGAATATGTAGACCAGATGCTGCGAGACAACATCATTGAGCCCTCCTTCTCGCCTTGGTCTTCACCGGTGGTCCTAGTCCCCAAACCTGATGGTTCATTCAGGTTTTGTGCAGACTACAGAAGGTTGAACAGCAAGACGGTACCTGATGCTTACCCAATGCCGCTGATTCATGACATCTTAGAATTCCTGGAAGGCGCCTCCTGGTTTAGCGCATTGGATTTGCAGTCAGGGTACTGGCAGGTGGAGATGGAGGAGCTGAGTAAGGAGAAGACAGCCTTTATCACCGCTAAGGGGCTATTCCATTTCAAATCTATGCCGTATGGTCTCAGGAATGCTGCTGCTATCTTTCAACGGGGAGTGGAGATTGACAAAGAGAAGACTAAAGCAGTAGCTGAATTTCCACCACCACAAGATCTCAAGGCACTACAACAGTTCCTGGGTTTGGCCGGGTGGTACCACAAGTTCATTCCCGCGAACATCACTGCTCCATTAAACCACCTAAAAAAGAAGGGAACAAAGTGGGAGTGGACTTCAGAGTGTCAAGCCAGTATGGATGACCTTAAACAAGCTCTTCAAAACCCACCTGTATTAATACAACCTGACATCAATAAACCCTTCCAGGTCCATACAGATGCGAGTGATGTGGGACTCGGCGCAATTCTTACCCAACACTCTGACGAAGGGGAGAAGGTGGTGGCCTATGCCTTAAGGACCTTGACAGGCGCAGAGAAGAATTACAGTACATCTGAGAAAGAGTGTCTAGCAGTGGTCTGGGTGGTAGAAAAGTATAGGCATTACCTGGAGGGTAGGCCGTTCATCGTGTTTACTGATCACGCAGTTCTTGTCTGGGCCTTCAATTGCCCCAAAACCTCATCACGTCTAACACGCTGGATTCTTCAACTCCAACAATTCAATTTCCAGGTCCATCATAGGAAGGGCTGTCTAAATATGGGACCTGATGCCTTATCCAGGGTTTATGCGCCTTCATCCATTGACACTGCCCCTTGTCTCCATAACGTCACCCCACTTAACTACCTTACCTCACTCACTGGAAGAAATAGTGAAAGCACAACAGTCAGTACCCTCACTCACCTGAAAGATGGCATTAACCCTCGCTCGACCAAAGAAAGGTCTTATTCCTTTGAGGAACAGCAGGGAGTGCTGTATTGGAGAGTCCCTTTAAAAAACAGAGGAGAAAAGTATCAGTTAGTGGTACCACAGGCTCTAATTTCAGATTGCTTGTACTACTATCATGACAATCCTCTTGGGGGTCATCTGGGACAACTAAAGACTCTGTTGAAAATCCTAGAGATGGCATGGTGGCCGACTGTGAGTAAGGACGTGTGGCAGCATTGGGTAGAAATGTTCCCACTGAGAGACGCCAAAACCCAGAAAATAGTAAAAGTTCTCAAAGAAAAGATCTTTACCCATTGGGGGGTCCCTAAGTACCTGGTATCCGATAGGGGACCCCAGTTTACATCTATCGTTTTGGCGGACCTGTGCAAGACATGGGGTTGTGTACAAAAATTAACCACCAGCTCTCATCCACATTCAAACCTAACAGAAATGATCAACAGGACTGTAAAAACCATGATTGCTGCATATGTGGGTCAACAACATCAGACCTGGGACCAGTGGATATCAGAGTTCCATTTTGCCCTCAACACCACCCAACAGGAGAGCACCAGTAAAACATCTGCAGAGCTCATGTTGGGCAGACAAATTGTGTTGTGGCAACCCACCTTGAACTGATGTTTTTAATGTGGTAAACTTGAAGCGCTATTACGGGTGCTCTCCTGGATCTATGTGGCACAGCCAAATAAA

Function

NR:

description
pol polyprotein, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000080_04911814_04914963.mRNA True 2717 mRNA 0.48 4 4911742 4914963

Neighbor

gene id symbol gene type direction distance location
CI01000080_04778886_04784529 NA coding downstream 127213 4778611 ~ 4784529 (-)
CI01000080_04611752_04614340 EPHA3 coding downstream 297402 4610559 ~ 4614340 (-)
CI01000080_04578958_04583985 NA coding downstream 327378 4578488 ~ 4584364 (-)
CI01000080_04517413_04566482 EPHA3 coding downstream 345047 4516905 ~ 4566695 (-)
CI01000080_04488197_04502798 NA coding downstream 407208 4487831 ~ 4504534 (-)
CI01000080_05119672_05121617 NA coding upstream 204093 5119056 ~ 5121754 (-)
CI01000080_05168869_05169303 NA coding upstream 252084 5167047 ~ 5169353 (-)
G293234 NA non-coding downstream 146874 4764582 ~ 4764868 (-)
G293255 NA non-coding downstream 172456 4738849 ~ 4739286 (-)
G293242 NA non-coding downstream 199553 4711987 ~ 4712189 (-)
G293209 NA non-coding downstream 203517 4708002 ~ 4708225 (-)
G293104 NA non-coding downstream 254737 4656753 ~ 4657005 (-)
G293302 NA non-coding upstream 54580 4969543 ~ 4971388 (-)
G293308 NA non-coding upstream 82382 4997345 ~ 4997820 (-)
G293224 NA non-coding upstream 85367 5000330 ~ 5000650 (-)
G293314 NA non-coding upstream 90454 5005417 ~ 5005663 (-)
G293318 NA non-coding upstream 94700 5009663 ~ 5010680 (-)
G292714 NA other downstream 1183732 3715481 ~ 3728010 (-)
CI01000080_03207204_03212602 NA other downstream 1693339 3207204 ~ 3212913 (-)
G292387 NA other downstream 2168496 2733587 ~ 2743246 (-)
G292349 NA other downstream 2386333 2518078 ~ 2525409 (-)
G292089 NA other downstream 3239822 1635762 ~ 1693395 (-)

Expression


Co-expression Network