G290209


Basic Information

Item Value
gene id G290209
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000080
NCBI id null
chromosome length 5175454
location 25470 ~ 28235 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU329192
GTGCCATACTGGAGTAAGTGTGGTGCTCTTCCGCATGTAAAATAGATGATGAAGTTTGTTATAATATCCAATAACCATCTCCTTATCACTTTTCATCAGTTTTAGAATTTATGATCGTAATTATGGTAAGGAAATGGTAAGTATACAAGGTTTCAATTATTAGCATTAGTTAACTAAATTAATTAACAGGATCTAACAGTGAATAACACTTCTACAGCATTATTAATCATAATGTTAATTTCAGCATTGACTAATGCATCTTTAAATTCAAACATTACAATTGTTGATATTAGTCAATGCACTGTGAACTAACATGAACAAACAATGAAAAAATTAACAAAGATTAATACAGTAAAATGTATTGCTCATTGTTAGTTCAAGTTATCCAATGCATAAACTAATGTTAACAATTGAGATATCATTGAAAAGTTTTAGTGAGGAACTATTTGTATAGTAAATACTTAATTAGTGGTAGTAGTAACCAAAAAAAAAAAGGTTATAAACTATTGTTCAAAAGTTTGGGGTCGGTAAGATTTTTTAAAAATGTTTTTGAAAGAAGTAACTTATGCTCACCAAGGCTGCATTGTAATATTGTGAAATATTATTACAATATAAAATCACTATTTTCTATTTTAATATGTTAAAGTGTAATTTATTTCTGTGATGGCAAAGCTGAATTTTCAGCACTCATTACTCCAGTCTTCAGTGTCACATGATCCTTCTTCCATGATCCCTTAGATCCCTCATTTCACTGTCAGAAAGAAACAGACATACGGAGCCCCAGACATGACATACAGGATAATAATAGTAGG

Function

NR:

description
PREDICTED: uncharacterized protein LOC109082677

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU329192 True 812 lncRNA 0.30 2 25470 28235

Neighbor

gene id symbol gene type direction distance location
CI01000080_00000621_00005854 MCTP1A, MCTP1 coding downstream 19616 547 ~ 5854 (-)
CI01000080_00103467_00104168 NA coding upstream 75081 103316 ~ 104188 (-)
CI01000080_00118423_00142677 TTC37 coding upstream 90188 118423 ~ 142677 (-)
CI01000080_00202124_00211154 HMGCR, HMGCRA coding upstream 173706 201941 ~ 211154 (-)
CI01000080_00292016_00307681 CCDC180 coding upstream 263511 290561 ~ 307681 (-)
CI01000080_00309567_00317169 CARD9 coding upstream 279811 308046 ~ 317669 (-)
G290211 NA non-coding upstream 16030 44265 ~ 63306 (-)
G290191 NA non-coding upstream 86130 114365 ~ 117499 (-)
G290199 NA non-coding upstream 89396 117631 ~ 117892 (-)
G290194 NA non-coding upstream 114914 143149 ~ 152646 (-)
G290202 NA non-coding upstream 132289 160524 ~ 160865 (-)
G290197 NA other upstream 244162 272397 ~ 279847 (-)
G290261 NA other upstream 298558 327689 ~ 329517 (-)
G290314 NA other upstream 379650 407885 ~ 408144 (-)
G292089 NA other upstream 1607527 1635762 ~ 1693395 (-)
G292349 NA other upstream 2489843 2518078 ~ 2525409 (-)

Expression


Co-expression Network