Gene
RNA
| Item | Value |
|---|---|
| gene id | G290222 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000080 |
| NCBI id | null |
| chromosome length | 5175454 |
| location | 161357 ~ 161932 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU329206 | False | 576 | lncRNA | 0.49 | 1 | 161357 | 161932 |
| TU329205 | True | 260 | lncRNA | 0.60 | 1 | 161673 | 161932 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000080_00118423_00142677 | TTC37 | coding | downstream | 18680 | 118423 ~ 142677 (-) |
| CI01000080_00103467_00104168 | NA | coding | downstream | 57169 | 103316 ~ 104188 (-) |
| CI01000080_00000621_00005854 | MCTP1A, MCTP1 | coding | downstream | 155503 | 547 ~ 5854 (-) |
| CI01000080_00202124_00211154 | HMGCR, HMGCRA | coding | upstream | 40009 | 201941 ~ 211154 (-) |
| CI01000080_00292016_00307681 | CCDC180 | coding | upstream | 129814 | 290561 ~ 307681 (-) |
| CI01000080_00309567_00317169 | CARD9 | coding | upstream | 146114 | 308046 ~ 317669 (-) |
| CI01000080_00318151_00318865 | NA | coding | upstream | 155952 | 317884 ~ 318865 (-) |
| CI01000080_00319743_00328159 | NA | coding | upstream | 157811 | 319743 ~ 328159 (-) |
| G290202 | NA | non-coding | downstream | 492 | 160524 ~ 160865 (-) |
| G290194 | NA | non-coding | downstream | 8711 | 143149 ~ 152646 (-) |
| G290199 | NA | non-coding | downstream | 43465 | 117631 ~ 117892 (-) |
| G290191 | NA | non-coding | downstream | 43858 | 114365 ~ 117499 (-) |
| G290211 | NA | non-coding | downstream | 98051 | 44265 ~ 63306 (-) |
| G290224 | NA | non-coding | upstream | 1736 | 163668 ~ 163876 (-) |
| G290223 | NA | non-coding | upstream | 2250 | 164182 ~ 164394 (-) |
| G290205 | NA | non-coding | upstream | 2639 | 164571 ~ 165474 (-) |
| G290203 | NA | non-coding | upstream | 36777 | 198709 ~ 199619 (-) |
| G290252 | NA | non-coding | upstream | 89736 | 251668 ~ 251933 (-) |
| G290197 | NA | other | upstream | 110465 | 272397 ~ 279847 (-) |
| G290261 | NA | other | upstream | 164861 | 327689 ~ 329517 (-) |
| G290314 | NA | other | upstream | 245953 | 407885 ~ 408144 (-) |
| G292089 | NA | other | upstream | 1473830 | 1635762 ~ 1693395 (-) |
| G292349 | NA | other | upstream | 2356146 | 2518078 ~ 2525409 (-) |
