Gene
RNA
| Item | Value |
|---|---|
| gene id | G290529 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000080 |
| NCBI id | null |
| chromosome length | 5175454 |
| location | 581459 ~ 581692 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU329547 | True | 234 | lncRNA | 0.33 | 1 | 581459 | 581692 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000080_00521848_00524367 | OTP, OTPA, OTPB | coding | downstream | 57069 | 521081 ~ 524390 (-) |
| CI01000080_00330537_00333221 | NA | coding | downstream | 248238 | 330242 ~ 333221 (-) |
| CI01000080_00328119_00328700 | NA | coding | downstream | 252759 | 328119 ~ 328700 (-) |
| CI01000080_00319743_00328159 | NA | coding | downstream | 253300 | 319743 ~ 328159 (-) |
| CI01000080_00318151_00318865 | NA | coding | downstream | 262594 | 317884 ~ 318865 (-) |
| CI01000080_00597523_00605227 | LHFPL2B | coding | upstream | 15623 | 597315 ~ 606452 (-) |
| CI01000080_00614889_00638900 | HOMER1, HOMER1B | coding | upstream | 32170 | 613862 ~ 640684 (-) |
| CI01000080_00670914_00678760 | MTX3 | coding | upstream | 89057 | 670749 ~ 678760 (-) |
| CI01000080_00699809_00719764 | SERINC5 | coding | upstream | 117933 | 699625 ~ 719764 (-) |
| CI01000080_00737755_00742405 | CDK7 | coding | upstream | 155819 | 737511 ~ 742647 (-) |
| G290528 | NA | non-coding | downstream | 12703 | 568553 ~ 568756 (-) |
| G290362 | NA | non-coding | downstream | 78051 | 502326 ~ 503408 (-) |
| G290361 | NA | non-coding | downstream | 79392 | 501804 ~ 502067 (-) |
| G290360 | NA | non-coding | downstream | 79821 | 500389 ~ 501638 (-) |
| CI01000080_00292016_00307681 | CCDC180 | non-coding | downstream | 283462 | 290561 ~ 307681 (-) |
| G290530 | NA | non-coding | upstream | 164 | 581856 ~ 582134 (-) |
| G290535 | NA | non-coding | upstream | 29326 | 611018 ~ 611226 (-) |
| G290517 | NA | non-coding | upstream | 64560 | 646252 ~ 647515 (-) |
| G290522 | NA | non-coding | upstream | 148308 | 730000 ~ 735161 (-) |
| G290606 | NA | non-coding | upstream | 216750 | 798442 ~ 798929 (-) |
| G290314 | NA | other | downstream | 173315 | 407885 ~ 408144 (-) |
| G290261 | NA | other | downstream | 251942 | 327689 ~ 329517 (-) |
| G290197 | NA | other | downstream | 301612 | 272397 ~ 279847 (-) |
| G292089 | NA | other | upstream | 1054070 | 1635762 ~ 1693395 (-) |
| G292349 | NA | other | upstream | 1936386 | 2518078 ~ 2525409 (-) |
| G292387 | NA | other | upstream | 2151895 | 2733587 ~ 2743246 (-) |
| CI01000080_03207204_03212602 | NA | other | upstream | 2627293 | 3207204 ~ 3212913 (-) |
| G292714 | NA | other | upstream | 3133789 | 3715481 ~ 3728010 (-) |
