Gene
RNA
| Item | Value |
|---|---|
| gene id | G290535 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000080 |
| NCBI id | null |
| chromosome length | 5175454 |
| location | 611018 ~ 611226 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU329553 | True | 209 | lncRNA | 0.33 | 1 | 611018 | 611226 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000080_00597523_00605227 | LHFPL2B | coding | downstream | 4566 | 597315 ~ 606452 (-) |
| CI01000080_00521848_00524367 | OTP, OTPA, OTPB | coding | downstream | 86628 | 521081 ~ 524390 (-) |
| CI01000080_00330537_00333221 | NA | coding | downstream | 277797 | 330242 ~ 333221 (-) |
| CI01000080_00328119_00328700 | NA | coding | downstream | 282318 | 328119 ~ 328700 (-) |
| CI01000080_00319743_00328159 | NA | coding | downstream | 282859 | 319743 ~ 328159 (-) |
| CI01000080_00614889_00638900 | HOMER1, HOMER1B | coding | upstream | 2636 | 613862 ~ 640684 (-) |
| CI01000080_00670914_00678760 | MTX3 | coding | upstream | 59523 | 670749 ~ 678760 (-) |
| CI01000080_00699809_00719764 | SERINC5 | coding | upstream | 88399 | 699625 ~ 719764 (-) |
| CI01000080_00737755_00742405 | CDK7 | coding | upstream | 126285 | 737511 ~ 742647 (-) |
| CI01000080_00861858_00877122 | LNPEP | coding | upstream | 250519 | 861745 ~ 877638 (-) |
| G290530 | NA | non-coding | downstream | 28884 | 581856 ~ 582134 (-) |
| G290529 | NA | non-coding | downstream | 29326 | 581459 ~ 581692 (-) |
| G290528 | NA | non-coding | downstream | 42262 | 568553 ~ 568756 (-) |
| G290362 | NA | non-coding | downstream | 107610 | 502326 ~ 503408 (-) |
| G290361 | NA | non-coding | downstream | 108951 | 501804 ~ 502067 (-) |
| G290517 | NA | non-coding | upstream | 35026 | 646252 ~ 647515 (-) |
| G290522 | NA | non-coding | upstream | 118774 | 730000 ~ 735161 (-) |
| G290606 | NA | non-coding | upstream | 187216 | 798442 ~ 798929 (-) |
| G290616 | NA | non-coding | upstream | 218222 | 829448 ~ 829648 (-) |
| G290632 | NA | non-coding | upstream | 242945 | 854171 ~ 854718 (-) |
| G290314 | NA | other | downstream | 202874 | 407885 ~ 408144 (-) |
| G290261 | NA | other | downstream | 281501 | 327689 ~ 329517 (-) |
| G290197 | NA | other | downstream | 331171 | 272397 ~ 279847 (-) |
| G292089 | NA | other | upstream | 1024536 | 1635762 ~ 1693395 (-) |
| G292349 | NA | other | upstream | 1906852 | 2518078 ~ 2525409 (-) |
| G292387 | NA | other | upstream | 2122361 | 2733587 ~ 2743246 (-) |
| CI01000080_03207204_03212602 | NA | other | upstream | 2597759 | 3207204 ~ 3212913 (-) |
| G292714 | NA | other | upstream | 3104255 | 3715481 ~ 3728010 (-) |
