Gene
RNA
| Item | Value |
|---|---|
| gene id | G290632 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000080 |
| NCBI id | null |
| chromosome length | 5175454 |
| location | 854171 ~ 854718 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU329659 | True | 548 | lncRNA | 0.52 | 1 | 854171 | 854718 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000080_00737755_00742405 | CDK7 | coding | downstream | 111524 | 737511 ~ 742647 (-) |
| CI01000080_00699809_00719764 | SERINC5 | coding | downstream | 134407 | 699625 ~ 719764 (-) |
| CI01000080_00670914_00678760 | MTX3 | coding | downstream | 175411 | 670749 ~ 678760 (-) |
| CI01000080_00614889_00638900 | HOMER1, HOMER1B | coding | downstream | 213487 | 613862 ~ 640684 (-) |
| CI01000080_00597523_00605227 | LHFPL2B | coding | downstream | 247719 | 597315 ~ 606452 (-) |
| CI01000080_00861858_00877122 | LNPEP | coding | upstream | 7027 | 861745 ~ 877638 (-) |
| CI01000080_00888517_00897726 | ERAP2 | coding | upstream | 33233 | 887951 ~ 897726 (-) |
| CI01000080_00905794_00918088 | RGMB | coding | upstream | 51037 | 905755 ~ 920428 (-) |
| CI01000080_01037946_01040084 | NA | coding | upstream | 183126 | 1037844 ~ 1040306 (-) |
| CI01000080_01048748_01071339 | MAMDC2A, MAMDC2 | coding | upstream | 194030 | 1048748 ~ 1071339 (-) |
| G290616 | NA | non-coding | downstream | 24523 | 829448 ~ 829648 (-) |
| G290606 | NA | non-coding | downstream | 55242 | 798442 ~ 798929 (-) |
| G290522 | NA | non-coding | downstream | 119010 | 730000 ~ 735161 (-) |
| G290517 | NA | non-coding | downstream | 206656 | 646252 ~ 647515 (-) |
| G290535 | NA | non-coding | downstream | 242945 | 611018 ~ 611226 (-) |
| G290652 | NA | non-coding | upstream | 87143 | 941861 ~ 942067 (-) |
| G290902 | NA | non-coding | upstream | 164577 | 1019295 ~ 1019558 (-) |
| G290941 | NA | non-coding | upstream | 191371 | 1046089 ~ 1046365 (-) |
| G290945 | NA | non-coding | upstream | 217527 | 1072245 ~ 1072452 (-) |
| G290947 | NA | non-coding | upstream | 228403 | 1083121 ~ 1083365 (-) |
| G290314 | NA | other | downstream | 446027 | 407885 ~ 408144 (-) |
| G290261 | NA | other | downstream | 524654 | 327689 ~ 329517 (-) |
| G290197 | NA | other | downstream | 574324 | 272397 ~ 279847 (-) |
| G292089 | NA | other | upstream | 781044 | 1635762 ~ 1693395 (-) |
| G292349 | NA | other | upstream | 1663360 | 2518078 ~ 2525409 (-) |
| G292387 | NA | other | upstream | 1878869 | 2733587 ~ 2743246 (-) |
| CI01000080_03207204_03212602 | NA | other | upstream | 2354267 | 3207204 ~ 3212913 (-) |
| G292714 | NA | other | upstream | 2860763 | 3715481 ~ 3728010 (-) |
