Gene
RNA
| Item | Value |
|---|---|
| gene id | G290936 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000080 |
| NCBI id | null |
| chromosome length | 5175454 |
| location | 1166856 ~ 1167231 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU330003 | True | 376 | lncRNA | 0.24 | 1 | 1166856 | 1167231 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000080_01048748_01071339 | MAMDC2A, MAMDC2 | coding | downstream | 95517 | 1048748 ~ 1071339 (-) |
| CI01000080_01037946_01040084 | NA | coding | downstream | 126550 | 1037844 ~ 1040306 (-) |
| CI01000080_00905794_00918088 | RGMB | coding | downstream | 246428 | 905755 ~ 920428 (-) |
| CI01000080_00888517_00897726 | ERAP2 | coding | downstream | 269130 | 887951 ~ 897726 (-) |
| CI01000080_00861858_00877122 | LNPEP | coding | downstream | 289218 | 861745 ~ 877638 (-) |
| CI01000080_01172564_01172904 | NA | coding | upstream | 4308 | 1171539 ~ 1172904 (-) |
| CI01000080_01179133_01187378 | NA | coding | upstream | 10971 | 1178202 ~ 1187378 (-) |
| CI01000080_01207732_01214256 | NA | coding | upstream | 40334 | 1207565 ~ 1214412 (-) |
| CI01000080_01256819_01266378 | PPEF2, PPEF2A | coding | upstream | 89353 | 1256584 ~ 1266378 (-) |
| CI01000080_01268777_01277656 | NA | coding | upstream | 100972 | 1268203 ~ 1277997 (-) |
| G290951 | NA | non-coding | downstream | 63909 | 1102657 ~ 1102947 (-) |
| G290950 | NA | non-coding | downstream | 64559 | 1101936 ~ 1102297 (-) |
| G290949 | NA | non-coding | downstream | 75744 | 1090065 ~ 1091112 (-) |
| G290947 | NA | non-coding | downstream | 83491 | 1083121 ~ 1083365 (-) |
| G290945 | NA | non-coding | downstream | 94404 | 1072245 ~ 1072452 (-) |
| G290908 | NA | non-coding | upstream | 61982 | 1229213 ~ 1240587 (-) |
| G291000 | NA | non-coding | upstream | 74430 | 1241661 ~ 1241903 (-) |
| G291002 | NA | non-coding | upstream | 77226 | 1244457 ~ 1244679 (-) |
| G291013 | NA | non-coding | upstream | 125253 | 1292484 ~ 1292796 (-) |
| G291014 | NA | non-coding | upstream | 125699 | 1292930 ~ 1293246 (-) |
| G290314 | NA | other | downstream | 758712 | 407885 ~ 408144 (-) |
| G290261 | NA | other | downstream | 837339 | 327689 ~ 329517 (-) |
| G290197 | NA | other | downstream | 887009 | 272397 ~ 279847 (-) |
| G292089 | NA | other | upstream | 468531 | 1635762 ~ 1693395 (-) |
| G292349 | NA | other | upstream | 1350847 | 2518078 ~ 2525409 (-) |
| G292387 | NA | other | upstream | 1566356 | 2733587 ~ 2743246 (-) |
| CI01000080_03207204_03212602 | NA | other | upstream | 2041754 | 3207204 ~ 3212913 (-) |
| G292714 | NA | other | upstream | 2548250 | 3715481 ~ 3728010 (-) |
