G292089


Basic Information

Item Value
gene id G292089
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000080
NCBI id null
chromosome length 5175454
location 1635762 ~ 1693395 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU331407
TGAAATTTAACATAGTTACATGTGACTTTTTTTATTACAAAAGTGCGACTGGTCTTATTACAATTAATTAGAGTCCATGTAAACGCAGCAAGTTTAACACTGAGAAAGCAATGAATGTAAGATAGATGCATACTAAATTTTTGTCCATATCTGTTATTTGTTACCTGGCAGTTGACGCCATGGTATCCCTGAGGGCAGGTGCACTTGTATGTGCCATAGCTGTCCTGACAGGTGCCTCCATTCTTGCAGGGTCTGGAGTCACACTCGTTGATGTCATGCTGGCAGTAGTTTCCAGTGAACCCCGCTGGGCACAGGCAGGTAAAGCTGTTGATGCCATCTACGCATGTGCCACCATTAAAACAAGAGCTCTCAGTACAGTCAGGTGTGTTGTTCTCACAGTGAATCCCACTAAATCCAGGTGGACAGGTACATGTGTAACTGTTCACACAATCAGTGCAGTTCGCACCATTTTTACACGGGTTACTATCACATTCATTAATGTCCTCCTCACATCTGCTGCCCCGGAAACCTGGTAGGCAGGTGCAAGTGAAGGCGTTCACTGCGTCTTTGCAGAAGCCACCGTTACTGCAAGGGTTGGGCTTGCAGTCGTCAATGTCGGTCTCACAGTTGCGGCCAGTGTACCCCGATTTGCAACTGCATTTGTAGCTGCCAATAGAGTTTTGACAGATGGCATCATTTTGGCAAGGGTTTTTGACACATTCATTAATGTCCACCTCACATGTTTGGCCTTGCCATCCCTCAGGGCACACACAAGAGAAGCTCTCGTAGTCTTCGGACTCCTTACATACACCTCCATTCTTACAAGGTTTAGAGCTGCACGGGGCCAACAGGGTCTCACAGTTCTCGCCAGTGTAAGGCAGCAAACAGTTGCATTTATATCCAGCCACGTCATCAATACAGGTTCCTTGATTCAAGCAAGGGTTGGAGGCGCATTCATTGATGTTAGTTTGGCAATTGGGACCACTGAAGCCGGCGCGGCATGTGCAGACATAGCCACTGGTCATGTCCTTACAGGTGCCTCCATTCATACAGGGGTTGGACTCACACTCATTGTTATTGATGTCACAGTTGACACCACTCCATCCAGAGTCACAAATACAGTTATATCCATTGACTTTGTCTTCACAGTGTCCATGAATACAGGGGTTGCTAAGGCATTCGTTGAGCTGTGACTGGCAGGTAGTGTCATGATACCCCTCTCTGCACAGGCATGTAAAGCCATTGACTCGATCAACGCAGGTTCCACCATTGTGACAGGGGTTGATGGCACATTCATCAATATTGATGTTACACATTTTCCCTGTGTATCCTGGTTCACAGGCACACTCGTAACCATTTATCTTGTCAATGCACCTTCCATAATCGCAGGGATTGCTCTGACAGTCATCTAGGTTAACCTCGCAGTTAGCACCTGCGGTTCCTTTTGGGCAGATGCATAAGTAGGCATTCTCACGGTCCTGGCAGGTGCCTCCATTTTGGCACGGCTGACTGAGACACTCATTAATGTTGATCTCACACAGACGGCCCGTGAAACCTGCACGGCAGGAACAGGTGAAGGACGCCAGGCCGTCTTTACAGGTGCCATAGTGACATGGGTTGGAAAGACACTCATCTACATCTGTCTCACAGTGCTGCCCTGTGTAACCTTCAGTGCACTGGCAGGTGTACATGTTGGGTCCATCAATACACTTGGCCCCATTTTTACATGGGGTGCTAGCGCACTCATCAATGTCGAACTGGCACTGGCTGCCCGAGAATCCTGTGGGGCACTCGCATTGGTAGTTGTTGATCTTGTCGATGCACTTCCCATTGTTGAGGCAGGGCATGCTATTGCACTCATCAGCATTGATCTGGCAGAAGACTCCCTCGTACCCTGGCATACAGATGCAATGGAAGCCTCCAATTTGATCCAAACAGGTAGCATCATTCTGGCATGGGTTGGACATGCACTCGTTTATGTCCAGTTCACATCGAGCTCCTACATATCCCTGCAGACATTTACACTGGAAGGAACCTTTTGTGTTTATACACTTTCCAGCATGTTCACAAGGGTTTGCACCCAGTGAGCATTCGTCAACATCTTGGTCACAGGCTGGGCCAACATAACCCAGAGGACAGGTACAGATGGCCTTGCCGTTGACAGGGTTGGTGTCACAGTTGGAGCCTTTCTGACACGGGTTACTAATGCAAGCATCATCAAGGTGACACAGCAGACCTGTGCGCCCGTGAGGACATTCACAGAGGAAGGAGGCCACCCGATCATGACACGTGGCTCCTGCGTGGCAGGCAGCATCTGCGCAGTCATCGATGTTCTCGCTGCAGTCATCTCCTGTCCAGCCGTTCACACACACACAGTTGTATCCACCCTGCGTGTTCAAGCACGTACCACCGTTCTGGCAGGAATTGGGCATCAAATCGCACTCGTTGACGTCTTCGGTACAAAACTGACCTGTCCACTCTGGCTTGCATTGACAATTGTAAGTGTTCACTCCATCCACACAGGTCCCTCCGTTAAGGCAGCGATGGTCTGGACAGTCATCAATGTTCTCCTCGCAGTTCTGGCCACTAAAGCCTGGCAAACAGGAGCACTCGTAGCTCGTCTCTCCCTTCTGTACACAGGTGCCCCCGTGGTAGCATGGTGAGGGGTTACATGGCTGATAGAGGGTCTCGCAGTGTTTCCCGGTGTACTCTGCAGGGCAGTTGCAGCGATACGTGCCCACCTCATTCTCACACACACCACCGTTCTTGCAAGGAGAGGGAATCTGGGCACACTCGTTGACGTCTTGTTTGCAGGTTTGGCCTGAGAAGAACGGTGTGCAGTGGCAGAGGTAGTCAAAATCAAAGGGACTACACTGACCTCCGTTGGCACAAGGATTTGAGGCACAAGGATCAGCTTGCTGGCAGTTTTTACCTGACCAGCCTGGTGGGCATTTACACCTGTAATTGTAGATGCTGGTGAGTTCACATGTGCCTCCGTTTCGGCACGGGGCGCTAAGGCACACGTTATTGGTGGGAGTGAGGCACAGTCGGTCCGTGTAGCCCAAGCTGCAGTTGCAGACAAAGTCCACCTTGTTGGCAGAAGTAATCAAATGGCACACGCCGCCATTTCTGCATGGAGAGTGGAAGCAAGGGTTGCGGAACTGGCATGCTGGGCCAGCATACTGATCGAGACACTTGCATTCTCCTCTCCCATCAGCAGTAGGTTCACATGTACCCTCATTTTGGCATTTTTCCGAACATTCCAGGCCTTGCGTCAAAGTAATGAGTGATATCAGAAGAATTAGTTTCACGAGGAAAAGATGCATTCCTTCTTATGGATAGTTGTGGGATTCCACGCAGGCTTAACATATATCCAACATTGGTCTGTTCAAGAAAAGGAAATAAATCACGAAAGTATAAAGAATAGATCCAAAAAATGGCACTTGTGGCTTGTCCTCGAGAGCTCCGGTGCTGCTCGTGCAGTCTCAGCTGAGTGAATGAAATCATGTATTCAAGGCTTCATTCTCCTGCTCTCATCCAGAGGCTCCTTCCGCC
>TU331420
TATGTTGTTAATATTTCAAGGTTTATTTAAACATTTTGTCATAATAATAATAAAAAAAACATCCCAACATGGAAAATAATGTGCGATAATTAAAACAGTAATATATCAGTAATACAAATTTACAAATATGCATGCAGCATATGCTTACATGTGAGTTTTGAAATGTTTTCTTCATTCAGAAGATTAAAGTAGGCTATCTGCTTCAATACATATATATGAAGGAACAGTTCAACTCACGGCCGCTTTAAGTGGCGCGGCTTGCCTCGTCAACTCTCTGAATGTGTGTGCGTGTAACGTAACAGGTTAACTAAACAATTAACTAAAGCTGTTCAATAAACTGTTTAAAACATGCAGTCACCCAATCAATACTGAGATTCTAGATGGTATAAACAAAGATATAATGAATCTTGACAAACTAAGGACGGATTCAAAATTGTCTCGTGTCTCTCTCTCTCTATCTCTCTCTCATCTGCCCGAATGCATGAGCGAATTGAACAGTGATTAACTTACTCATACAAGGTGTAAGACGTGCAAAGCTTCCTGTTGTCGCATCCATTCAGAAATCTGATCTTTCAGTCGTATTTAATCACTTTTCACTCTATATTAAAGTTTTTATCGCTCCGTGCAGCTGTCTCTCTATCTTTCTCTCATCTGCCCGAAAGCATGAGCGACATCATCGTGTATTATACAAACTCTAAATATATTGTTTTGTTAGTACTCGTGTATTTAAATGTCTGAAACCTAAAATAAACATTATTTGGTTGAAAACACTGCATATATGTGATATAGCTCTGCGCGCGTCAGTCTCTGGTTTAGCGCCAGCCAAAGCGCGCACGCACATTTTAATTTGGCAGTTGATCACGTGACGCGCTGAACGTTCTAATCACATCGGTGTGATCGTACGCTCCTGGGACCAGCAAAGACTGATCACACTGGTGTGATCGTACGCGTCAAAGGGTTAAAACACAGAAATGACGAACTGACGAAATCGAAAGTGAATGCATGAGCGAATGATTTCTTATGTCGGCGTGCCCTCTATTGGACGGAACTGCTCCTCTGGAGGCGCATTTTCATCAAATCCATGCAAGTCTGTGTATCCTGGTTCACAGGCACACTCGTAACCATTTATCTTGTCAATGCACCTTCCATAATCGCAGGGATTGCTCTGACAGTCATCTAGGTTAACCTCGCAGTTAGCACCTGCGGTTCCTTTTGGGCAGATGCATAAGTAGGCATTCTCACGGTCCTGGCAGGTGCCTCCATTTTGGCACGGCTGACTGAGACACTCATTAATGTTGATCTCACACAGACGGCCCGTGAAACCTGCACGGCAGGAACAGGTGAAGGACGCCAGGCCGTCTTTACAGGTGCCATAGTGACATGGGTTGGAAAGACACTCATCTACATCTGTCTCACAGTGCTGCCCTGTGTAACCTTCAGTGCACTGGCAGGTGTACATGTTGGGTCCATCAATACACTTGGCCCCATTTTTACATGGGGTGCTAGCGCACTCATCAATGTCGAACTGGCACTGGCTGCCCGAGAATCCTGTGGGGCACTCGCATTGGTAGTTGTTGATCTTGTCGATGCACTTCCCATTGTTGAGGCAGGGCATGCTATTGCACTCATCAGCATTGATCTGGCAGAAGACTCCCTCGTACCCTGGCATACAGATGCAATGGAAGCCTCCAATTTGATCCAAACAGGTAGCATCATTCTGGCATGGGTTGGACATGCACTCGTTTATGTCCAGTTCACATCGAGCTCCTACATATCCCTGCAGACATTTACACTGGAAGGAACCTTTTGTGTTTATACACTTTCCAGCATGTTCACAAGGGTTTGCACCCAGTGAGCATTCGTCAACATCTTGGTCACAGGCTGGGCCAACATAACCCAGAGGACAGGTACAGATGGCCTTGCCGTTGACAGGGTTGGTGTCACAGTTGGAGCCTTTCTGACACGGGTTACTAATGCAAGCATCATCAAGGTGACACAGCAGACCTGTGCGCCCGTGAGGACATTCACAGAGGAAGGAGGCCACCCGATCATGACACGTGGCTCCTGCGTGGCAGGCAGCATCTGCGCAGTCATCGATGTTCTCGCTGCAGTCATCTCCTGTCCAGCCGTTCACACACACACAGTTGTATCCACCCTGCGTGTTCAAGCACGTACCACCGTTCTGGCAGGAATTGGGCATCAAATCGCACTCGTTGACGTCTTCGGTACAAAACTGACCTGTCCACTCTGGCTTGCATTGACAATTGTAAGTGTTCACTCCATCCACACAGGTCCCTCCGTTAAGGCAGCGATGGTCTGGACAGTCATCAATGTTCTCCTCGCAGTTCTGGCCACTAAAGCCTGGCAAACAGGAGCACTCGTAGCTCGTCTCTCCCTTCTGTACACAGGTGCCCCCGTGGTAGCATGGTGAGGGGTTACATGGCTGATAGAGGGTCTCGCAGTGTTTCCCGGTGTACTCTGCAGGGCAGTTGCAGCGATACGTGCCCACCTCATTCTCACACACACCACCGTTCTTGCAAGGAGAGGGAATCTGGGCACACTCGTTGACGTCTTGTTTGCAGGTTTGGCCTGAGAAGAACGGTGTGCAGTGGCAGAGGTAGTCAAAATCAAAGGGACTACACTGACCTCCGTTGGCACAAGGATTTGAGGCACAAGGATCAGCTTGCTGGCAGTTTTTACCTGACCAGCCTGGTGGGCATTTACACCTGTAATTGTAGATGCTGGTGAGTTCACATGTGCCTCCGTTTCGGCACGGGGCGCTAAGGCACACGTTATTGGTGGGAGTGAGGCACAGTCGGTCCGTGTAGCCCAAGCTGCAGTTGCAGACAAAGTCCACCTTGTTGGCAGAAGTAATCAAATGGCACACGCCGCCATTTCTGCATGGAGAGTGGAAGCAAGGGTTGCGGAACTGGCATGCTGGGCCAGCATACTGATCGAGACACTTGCATTCTCCTCTCCCATCAGCAGTAGGTTCACATGTACCCTCATTTTGGCATTTTTCCGAACATTCCAGGCCTTGCGTCAAAGTAATGAGTGATATCAGAAGAATTAGTTTCACGAGGAAAAGATGCATTCCTTCTTATGGATAGTTGTGGGATTCCACGCAGGCTTAACATATATCCAACATTGGTCTGTTCAAGAAAAGGAAATAAATCACGAAAGTATAAAGAATAGATCCAAAAAATGGCACTTGTGGCTTGTCCTCGAGAGCTCCGGTGCTGCTCGTGCAGTCTCAGCTGAGTGAATGAAATCATGTATTCAAGGCTTCATTCTCCTGCTCTCATCCAGAGGCTCCTTCCGCC
>TU331418
CACAGTTACCAGCGGCTAACAGCTAATGCTGCTTAATGAGATGAGGACTAGCAACCCGCACCTAAACTACAGCCCCTTTGTCAGCAATTAATGAAAACAGCCATATTTACCGCAACGTACCTTCCATATAATGAACTATCAACAATCCACTGTTAAAAATCTGTGGGTGAGAAATGAAAGAAAAAGGTAAAAGGCTCCTGTGGGAATCATGAGGCCACGTTTAGTCCGAGCAGATACGAGTGTCGGTGGATGAATGACAAACCCTAGAATAGCCACCCAGGTAGTCGGTGCAGGTTGCTCCGTTCTGGCAAGGATTGGGAATGCATTCATCCACCTGCTCCTCACAGTAGCTACCTGTGTATCCGGCCTGACAGTGACAGTAGTGTGTGTTTCCAGCATCCAGACACTGTCCAGAGTTACGACATAACCGCACCACCTCTACACCTAAAAGTGGGAGAATCAAACATCACAGCAGAGGGTTAAACCCTGAACAGCTTCACCAATATGTGGGTCTGGAGTCACACTCGTTGATGTCATGCTGGCAGTAGTTTCCAGTGAACCCCGCTGGGCACAGGCAGAGGGGGCGCTAATGGACAACAGAGGAAGAAGGAGTGCTAGAGCCTTTTTCTGGTACACTTTATCATGAGGCAGATCAGTTGGCTGATTTTAACAATCAGGTTCTGAAAACTGAGCTGAGATCAGTGGTTTCATGATAGCTATGTCTGGAGGCATAATATAAAATTTTCTTTGCATGTCAGAATGACAGTACAACTACCATTTAAAAGTATTTTTAAGTAGTTTCCATTTGTGGTATCGGCATGTTGGGTTTGTGTAAGAAACGGTCACAGTGGACAGGTATTCTTCAGTCTACAGACTACAGTATATTTAGGGAAAATTTGTTTCTCACCAATGAATTTAGTATTTTTATTATGCATTTTGTATTAAACATTTTAGGTTTTTATATAGTTTTAGAGTAAGAAGTATAAATACATATGTTTAATTAGTTATTAGCCTAGGGTTAATTATGTTCTACAGGTGAGTTTTTCTGTGTTCTCTCTTAAAGTCTTCCATGTATTGGATTTGAATTTTAGCCAATTGTTCTTTGGTGTGTATCTATTACTGCTTTGTTGATATGTTTCTAAGATAGTGGAGATGGGTTTGACTTGTTACCTCTTGGTTGTAACAATTGTCTGTTGTAGCCAGTATTTACACTTGAAAACTTATACAAATGCCACAAATAAGAGTGCAGTTGTTACCTCTCAGTACAGTCAGGTGTGTTGTTCTCACAGTGAATCCCACTAAATCCAGGTGGACAGGTACATGTGTAACTGTTCACACAATCAGTGCAGTTCGCACCATTTTTACACGGGTTACTATCACATTCATTAATGTCCTCCTCACATCTGCTGCCCCGGAAACCTGGTAGGCAGGTGCAAGTGAAGGCGTTCACTGCGTCTTTGCAGAAGCCACCGTTACTGCAAGGGTCTAGAGGAAAAGGACAAGGTTAGACATCAAGGCAAGATACACTAGATCACGTGTCAAATTCCGCTCATGGAGGGCCACCATCCATGCAAAATGTTGCTTCAAAACACTTGACTGGACGTTTCTAGTAATCCTGAAGACCATGATTAGCTGGTTCAGGTTGTTTAATTAGGTTTGGAGCAGTGGCCCTCCAGTAACTGAGCTTGACACCCCTAAACTAGATAAAAATAAGGATGAAACAGGATACTAACTGGGCTTGCAGTCGTCAATGTCGGTCTCACAGTTGCGGCCAGTGTACCCCGATTTGCAACTGCATTTGTAGCTGCCAATAGAGTTTTGACAGATGGCATCATTTTGGCAAGGGTTTTTGACACATTCATTAATGTCCACCTCACATGTTTGGCCTACAAGGTAGGGAAAGCACAAAATATCAATGTAGTTATGCATAATATTGATGCTAGAACAAAATTTACTGTTAGGTGTGAAGTTTGTACCTTGCCATCCCTCAGGGCACACACAAGAGAAGCTCTCGTAGTCTTCGGACTCCTTACATACACCTCCATTCTTACAAGGTTTAGAGCTGCACGGGGCCAACAGGGTCTCACAGTTCTCGCCTGGAAGATAATATATCAAAATACAAAGCATTAAAACACCTTCCATTCAGATTAGATATGTTTTTTCTATGCATAAATCTGTCTTTCAAGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGATTTGAGAGGAGACGTTCTTCCTTTAAGGAGGCCTAAATTTAGAAGGTAACACTATGTTTCAGCACAGGTTCTGTTTTGAGTCCTCTTTTCTCTGTTGGAGATTAGCCTGTCAGTTCTAGCAAAGCAAAGCACATTGGCCTATCTGTTTCCACGACGGCCGGACCCTGCAGGAAGCCAGCAGGTTTTCCTGCCATTGTCTGGCCATTTGCGTTTCTGTGAGAGAGGAAGTAGGGCAAACAGGAAACATGACAGGCTACTGTTCCCACCCTGGTATGAACAGATTCTTGTTATTCTTGATATGATGCTCTGTGGATTTTTCCAAAAAGAAAGACACTGGGAATTAATATGATTTCTGTTCCAGAGGCAGAACATCATTATCTGTTTTGTCAAATAACACAGTGAGAGGAAAGAATGTGTCGTCTGCTGAAATCACATTTTCCTGTATTGTCAACAGATACTTTCAGGGCTCATTGAGGGGCCATTGTCAACAAACAGGGACTAGATTGATGGAGGGGGGTCTCTTGTTCCTGACATTGAAATTGTAACTTAACAGGCTACAAACGACACATCATTTAAAGTGGTTTAAGTATAGTAATACTAACCAAAAATTATTTAAATAATCCATGAAATAGATTAAGTTTTTAGTTTTTTAGGCTTTTAATGATTCAACTAATAAATAACTACAACCAATTTTTATGTAAACTTGTTCTTTTAGCTTTGAGGTCTTAAAATGTAACTTTTAGCAGATG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU331407 False 3555 TUCP 0.50 19 1635762 1671920
TU331420 False 3323 TUCP 0.47 13 1635762 1663018
TU331418 True 2969 lncRNA 0.41 4 1669039 1693395

Neighbor

gene id symbol gene type direction distance location
CI01000080_01584991_01585618 NA coding downstream 83330 1583859 ~ 1585709 (-)
CI01000080_01542470_01546061 TMEM8C coding downstream 122256 1542239 ~ 1546783 (-)
CI01000080_01514171_01520784 SLC2A8 coding downstream 148201 1514136 ~ 1520838 (-)
CI01000080_01500308_01505160 NA coding downstream 163625 1499877 ~ 1505414 (-)
CI01000080_01442459_01464557 JAK2B coding downstream 202033 1441985 ~ 1467006 (-)
CI01000080_01726615_01730435 NA coding upstream 32594 1725989 ~ 1730435 (-)
CI01000080_01732531_01763618 KCNT1 coding upstream 38995 1732390 ~ 1763618 (-)
CI01000080_01954854_01959161 CFAP157 coding upstream 261296 1954691 ~ 1959324 (-)
CI01000080_01980939_01981859 NA coding upstream 286909 1979746 ~ 1982199 (-)
CI01000080_01987220_01990307 PTRH1 coding upstream 293103 1986498 ~ 1990697 (-)
G292114 NA non-coding downstream 20795 1647565 ~ 1648244 (-)
G292085 NA non-coding downstream 36767 1632064 ~ 1632272 (-)
G292050 NA non-coding downstream 156434 1512333 ~ 1512605 (-)
G292044 NA non-coding downstream 174100 1494581 ~ 1494939 (-)
G292043 NA non-coding downstream 176236 1490295 ~ 1492803 (-)
G292103 NA non-coding upstream 28903 1722298 ~ 1723134 (-)
G292099 NA non-coding upstream 29954 1723349 ~ 1724367 (-)
G292102 NA non-coding upstream 31300 1724695 ~ 1725025 (-)
G292096 NA non-coding upstream 119016 1812411 ~ 1812972 (-)
G292176 NA non-coding upstream 269143 1962538 ~ 1966566 (-)
G290314 NA other downstream 1260895 407885 ~ 408144 (-)
G290261 NA other downstream 1339522 327689 ~ 329517 (-)
G290197 NA other downstream 1389192 272397 ~ 279847 (-)
G292349 NA other upstream 824683 2518078 ~ 2525409 (-)
G292387 NA other upstream 1040192 2733587 ~ 2743246 (-)
CI01000080_03207204_03212602 NA other upstream 1515590 3207204 ~ 3212913 (-)
G292714 NA other upstream 2022086 3715481 ~ 3728010 (-)
G292040 NA non-coding downstream 148625 1486802 ~ 1487137 (-)
G292123 NA non-coding upstream 19460 1691380 ~ 1691674 (-)

Expression


Co-expression Network