Gene
RNA
| Item | Value |
|---|---|
| gene id | G292176 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000080 |
| NCBI id | null |
| chromosome length | 5175454 |
| location | 1962538 ~ 1966566 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU331518 | True | 945 | lncRNA | 0.43 | 4 | 1962538 | 1966566 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000080_01954854_01959161 | CFAP157 | coding | downstream | 3214 | 1954691 ~ 1959324 (-) |
| CI01000080_01732531_01763618 | KCNT1 | coding | downstream | 198920 | 1732390 ~ 1763618 (-) |
| CI01000080_01726615_01730435 | NA | coding | downstream | 232103 | 1725989 ~ 1730435 (-) |
| CI01000080_01584991_01585618 | NA | coding | downstream | 376829 | 1583859 ~ 1585709 (-) |
| CI01000080_01542470_01546061 | TMEM8C | coding | downstream | 415755 | 1542239 ~ 1546783 (-) |
| CI01000080_01980939_01981859 | NA | coding | upstream | 13738 | 1979746 ~ 1982199 (-) |
| CI01000080_01987220_01990307 | PTRH1 | coding | upstream | 19932 | 1986498 ~ 1990697 (-) |
| CI01000080_01993914_01996596 | NA | coding | upstream | 26882 | 1993448 ~ 1996622 (-) |
| CI01000080_02015292_02021186 | PMPCA | coding | upstream | 47818 | 2014384 ~ 2021587 (-) |
| CI01000080_02057026_02085109 | PTGS1 | coding | upstream | 88829 | 2055395 ~ 2085109 (-) |
| G292096 | NA | non-coding | downstream | 149566 | 1812411 ~ 1812972 (-) |
| G292102 | NA | non-coding | downstream | 237513 | 1724695 ~ 1725025 (-) |
| G292099 | NA | non-coding | downstream | 238171 | 1723349 ~ 1724367 (-) |
| G292103 | NA | non-coding | downstream | 239404 | 1722298 ~ 1723134 (-) |
| G292089 | NA | non-coding | downstream | 269143 | 1635762 ~ 1693395 (-) |
| G292197 | NA | non-coding | upstream | 26148 | 1992714 ~ 1992994 (-) |
| G292214 | NA | non-coding | upstream | 123439 | 2090005 ~ 2090238 (-) |
| G292242 | NA | non-coding | upstream | 244277 | 2210843 ~ 2211065 (-) |
| G292262 | NA | non-coding | upstream | 297048 | 2263614 ~ 2266106 (-) |
| G290314 | NA | other | downstream | 1554394 | 407885 ~ 408144 (-) |
| G290261 | NA | other | downstream | 1633021 | 327689 ~ 329517 (-) |
| G290197 | NA | other | downstream | 1682691 | 272397 ~ 279847 (-) |
| G292349 | NA | other | upstream | 551512 | 2518078 ~ 2525409 (-) |
| G292387 | NA | other | upstream | 767021 | 2733587 ~ 2743246 (-) |
| CI01000080_03207204_03212602 | NA | other | upstream | 1242419 | 3207204 ~ 3212913 (-) |
| G292714 | NA | other | upstream | 1748915 | 3715481 ~ 3728010 (-) |
